| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28190 |
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| Symbol | |
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| ID | 8388143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3057714 |
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| End bp | 3058496 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976850 |
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| Product | phosphoribosyl isomerase A |
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| Protein accession | YP_003134627 |
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| Protein GI | 257056795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
[TIGR01919] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGGT TCGACGCGTC CGGTTCCTAT AGTGGCCGGG TGAGTTTCAC ACTACTTCCG
GCCGTGGACG TGGCCGACGG ACAGGCAGTG CGCCTGGTGC AGGGCGAGGC GGGGACCGAG
ACCTCCTACG GATCACCGCT GGAGGCGGCG CTGGCCTGGC AGCGTGACGG TGCGGAATGG
ATCCATCTGG TGGATCTCGA CGCCGCGTTC GGTAGGGGCT CCAACCGAGA GTTGCTGGCC
GAGGTCATCG GCAAGCTGGA CGTGAACGTG GAACTGTCCG GCGGTATCCG GGACGACGAG
TCGTTGGCCG CCGCGCTCGC CACGGGGGCG CGCAGGATCA ACCTCGGCAC CGCCGCGTTG
GAGGACCCGG AGTGGAGCGC GAAGGTGGTC TCCACCCATG GGGACCGGAT CGCCATCGGG
CTCGACGTAC GGATCACCGA GGAAGGGCAC CGGCTGGCCG CGCGAGGCTG GACCAAGGAC
GGCGGTGACC TGTGGGAGAC GCTGGAACGT CTCGACCGTG ACGGTGCGCA GCGCTACGTC
GTCACCGACG TCAGCAAGGA CGGCACCTTG CGCGGGCCCA ACCTGGACCT GTTGCGCGAG
GTGACGGCGC GCACCGACGC CCCTGTGATC GCCTCGGGCG GCGTGTCCAG TCTCGACGAC
CTGCGCGCGC TCGCGGCCCT GGAACGTGAC GGCGTCGAGG GGGCCATCGT CGGTAAGGCG
CTGTACGCAG GTGCCTTCAC GTTGCCGGAG GCGCTCGAGG CCGTGGCACA GCCGCAGCGC
TGA
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| Protein sequence | MNRFDASGSY SGRVSFTLLP AVDVADGQAV RLVQGEAGTE TSYGSPLEAA LAWQRDGAEW
IHLVDLDAAF GRGSNRELLA EVIGKLDVNV ELSGGIRDDE SLAAALATGA RRINLGTAAL
EDPEWSAKVV STHGDRIAIG LDVRITEEGH RLAARGWTKD GGDLWETLER LDRDGAQRYV
VTDVSKDGTL RGPNLDLLRE VTARTDAPVI ASGGVSSLDD LRALAALERD GVEGAIVGKA
LYAGAFTLPE ALEAVAQPQR
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