| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28160 |
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| Symbol | |
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| ID | 8388140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3054491 |
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| End bp | 3055264 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976847 |
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| Product | imidazole glycerol phosphate synthase subunit hisF |
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| Protein accession | YP_003134624 |
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| Protein GI | 257056792 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCG CGGTGAGAGT CATTCCCTGT CTCGACGTCG ACGCGGGGCG TGTGGTCAAA
GGGGTCAATT TCGCCAATCT GCGGGACGCG GGTGATCCCG TCGAACTCGC CCGGCTCTAT
GACGCCGAGG GCGCGGACGA ACTCACGTTC CTCGACGTCA CAGCGTCGTC GAGTAACCGG
GAGACGACGT ATGACGTCGT GCGTAAGACC GCCGAGCAGG TGTTCATCCC CCTCACGGTG
GGTGGCGGTG TGCGCAGTGT CGACGACGTC GACAGGCTGC TGCGCGCCGG CGCCGACAAA
GTGAGCATCA ACACAGCCGC TGTGGCGAGG CCGGAGTTGC TTCGCGAGGC CTCGCGTCGA
TTCGGCGCCC AGTGCGTGGT GTTGTCGGTG GACGCCCGTC GCGTGCCCGA GGGCGAACAG
CCGACGCCGT CCGGTTTCGA GGTCACCACC CACGGGGGAC GCCGAGGCAC CGGTATCGAC
GTCGTCGAGT GGGCCGCTCG GGGTGAGGAG CTCGGGGTCG GCGAGATCCT GTTGAACTCG
GTGGACGCCG ACGGCACGAA AGAGGGCTTC GACCTGGAGC TGCTCGAACT CGTGCGTGCG
GCGGTCCGGG TCCCGCTCAT CGCCAGCGGT GGCGCGGGCG CGCTCGAACA CTTCCCGCCC
GCCGTGCGGG CCGGGGCCGA CGCCGTCCTG GCGGCCAGCG TGTTCCACTT CGGTGAGCTG
AAGATCGGCG ACGTGAAGGC CGCCCTGCGC GAAGAGGGCG TGGAGGTCCG GTGA
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| Protein sequence | MSVAVRVIPC LDVDAGRVVK GVNFANLRDA GDPVELARLY DAEGADELTF LDVTASSSNR
ETTYDVVRKT AEQVFIPLTV GGGVRSVDDV DRLLRAGADK VSINTAAVAR PELLREASRR
FGAQCVVLSV DARRVPEGEQ PTPSGFEVTT HGGRRGTGID VVEWAARGEE LGVGEILLNS
VDADGTKEGF DLELLELVRA AVRVPLIASG GAGALEHFPP AVRAGADAVL AASVFHFGEL
KIGDVKAALR EEGVEVR
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