| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_28010 |
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| Symbol | |
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| ID | 8388125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 3034809 |
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| End bp | 3036212 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976832 |
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| Product | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase |
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| Protein accession | YP_003134609 |
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| Protein GI | 257056777 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.127061 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGGG TCGTGAATTG GACTGTTGAT GTCCCCATCG ACGCCCTGCC CTCGCTGCCG
CCGTTGCCCG ACGAGATGCG CAAGCGGCTG GACGACGCGC TTTCTCGTCC CGCGGCGCAG
CAACCCGAAT GGCCCGACGC GGAGGCGGTC TCCCGGGTCC GGACGGTGTT GGAGAGCGTA
CCGCCGATCA CGGTGCCCGC GGAGGTCGAT CGCCTACGTG AACGGCTCGC CATGGTTGCA
CGCGGCGAGG CGTTCCTGCT CCAGGGCGGT GACTGCGCCG AGACGTTCGA GTCCAACACC
GAGCCCCACA TCCGCGCCAA CCTGCGCACG CTGCTGCAGA TGGCCGTGGT GCTCACGTAC
GGCGCGAGTC TTCCGGTGGT GAAGGTGGGG CGCATCGCGG GTCAGTACGC CAAGCCGCGT
TCCAACAACA CCGACGCCCT CGGACTGCCG GTGTACCGGG GCGACATCAT CAACTCGCTC
GCACCCGACC CCCAACTGCG CGTACCCGAC CCGAGCCGCA TGATCCGCGC CTACGCCAAC
TCGGGTGCCG CGATGAACCT CGTGCGGGCG CTGACGGGCG CCGGTATGGC CGACCTGGCC
CAGGTGCACG CGTGGAACAA GGACTTCGTG CGCACCTCCC CCGCCGGGGA GCGTTACGAG
GCGTTGGCCT CCGAGATCGA CCGTGGCCTG CGGTTCATGG CGGCCTGCGG GGTGAGCGAC
AACTCCCTGC ACTCCACCGA GATCTTCGCC AGCCACGAGG CGCTGTTGCT CGACTACGAG
CGCGCCATGC TGCGGCTCGA CGACCCCACG TCCGACAACC CGTCGCTGTA CAACCTGTCG
TCGCATTTCC TGTGGATCGG GGAGCGCACG CGCCAGCTCG ACGGTGCGCA CATCGCCTTC
GCCGAACTGA TGGCCAACCC GATCGGCGTC AAGATCGGAC CCACGACCAC GCCTGAGCAG
GCCCTCGAGT ACGTCGAACG GCTCGACCCG AAAAACGAGC CCGGCAGGCT CACCCTCATC
TCCCGGATGG GCAACGACAA GGTGCGCGAG GTGTTGCCCC CCATCGTCGA GAAGGTCGAG
GCGTCCGGGC ACAAGGTCAT CTGGCAGTGC GACCCGATGC ACGGCAACAC GCACGAGTCG
TCGAACGGCT ACAAGACCCG GCACTTCGAC CGCATCGTCG ACGAGGTCCA GGGCTTCTTC
GAGGTGCACC GCAAGCTCGG CAGCTACCCG GGTGGTATCC ACGTCGAGCT CACCGGTGAG
AACGTCACCG AATGTCTGGG CGGCGCCCAG GACATCTCAG ACCTCGACCT GTCCGGCCGC
TACGAGACGG CGTGCGACCC GAGGCTGAAC ACGCAGCAAT CGCTGGAACT GGCGTTCCTC
GTCGCCGAGA TGCTGCGTGC CTGA
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| Protein sequence | MLGVVNWTVD VPIDALPSLP PLPDEMRKRL DDALSRPAAQ QPEWPDAEAV SRVRTVLESV
PPITVPAEVD RLRERLAMVA RGEAFLLQGG DCAETFESNT EPHIRANLRT LLQMAVVLTY
GASLPVVKVG RIAGQYAKPR SNNTDALGLP VYRGDIINSL APDPQLRVPD PSRMIRAYAN
SGAAMNLVRA LTGAGMADLA QVHAWNKDFV RTSPAGERYE ALASEIDRGL RFMAACGVSD
NSLHSTEIFA SHEALLLDYE RAMLRLDDPT SDNPSLYNLS SHFLWIGERT RQLDGAHIAF
AELMANPIGV KIGPTTTPEQ ALEYVERLDP KNEPGRLTLI SRMGNDKVRE VLPPIVEKVE
ASGHKVIWQC DPMHGNTHES SNGYKTRHFD RIVDEVQGFF EVHRKLGSYP GGIHVELTGE
NVTECLGGAQ DISDLDLSGR YETACDPRLN TQQSLELAFL VAEMLRA
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