Gene Svir_27960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27960 
Symbol 
ID8388120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp3029789 
End bp3030703 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content68% 
IMG OID644976827 
Productcutinase 
Protein accessionYP_003134604 
Protein GI257056772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.391001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.108807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAATTC GCAGGCAGGC GGGCACCGGT GCCCGCGCCT CGATGGCGCG AGCGATCGGC 
GTGATGACCA CCGCTTTGGC CGTGCTCGTC GGCGCGGTGG GTGGTGTTGC GGGAGCTGAG
GTCTCCACAG CCCAGGACAA CCCTTACGAA CGTGGTCCCG ACCCGACGGA GGACAGCATC
GAGGCCATCC GCGGCCCGTT CTCGGTGGCC ACCGAGCGCG TGTCTTCCTT CGCCTCCGGC
TTCGGTGGCG GCACGATCTA CTACCCCAGG GAGACCGACG AGGGCACCTT CGGGGCCGTC
GCCGTCGCCC CGGGCTTCAC CGCCAGCCAG GGCAGCATGT CGTGGTACGG CGAGCGCGTC
GCCTCGCAGG GCTTCATCGT GTTCACCATC GACACCAACA CGCGCCTCGA CCAGCCCGGA
CAGCGTGGCC GTCAGTTGCT GGCCGCCCTG GACTACCTGG TGGAGCGCAG TGACCGGAAG
GTCCGCGAGC GGCTCGACCC GAACCGGCTC GCGGTCATGG GCCACTCGAT GGGCGGTGGC
GGTTCGCTGG AGGCGACCGT GATGCGGCCC TCGCTGAAGG CGTCCATCCC CCTGACGCCG
TGGAACCTGG ACAAGACCTG GGGCCAGGTC CAGGTGCCGA CGTTCATCAT CGGCGCCGAA
CTCGACACCA TCGCGTCGGT GCGGACCCAC GCGAAGCCGT TCTACGAGAG CCTGCCGAGC
TCGTTGCCGA AGGCGTACAT GGAGCTGGAC GGCGCCACCC ACTTCGCTCC GAACATCCCC
AACACCACGA TCGCGAAGTA CGTGATCTCG TGGCTCAAGC GGTTCGTGGA CGAGGACACC
CGCTACAGCC AGTTCCTCTG CCCCAACCCG ACCGACCGGG CGATCGAGGA GTACCGCTCG
ACCTGCCCGT ACTGA
 
Protein sequence
MRIRRQAGTG ARASMARAIG VMTTALAVLV GAVGGVAGAE VSTAQDNPYE RGPDPTEDSI 
EAIRGPFSVA TERVSSFASG FGGGTIYYPR ETDEGTFGAV AVAPGFTASQ GSMSWYGERV
ASQGFIVFTI DTNTRLDQPG QRGRQLLAAL DYLVERSDRK VRERLDPNRL AVMGHSMGGG
GSLEATVMRP SLKASIPLTP WNLDKTWGQV QVPTFIIGAE LDTIASVRTH AKPFYESLPS
SLPKAYMELD GATHFAPNIP NTTIAKYVIS WLKRFVDEDT RYSQFLCPNP TDRAIEEYRS
TCPY