Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27950 |
Symbol | |
ID | 8388119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 3026837 |
End bp | 3029608 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644976826 |
Product | response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein |
Protein accession | YP_003134603 |
Protein GI | 257056771 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.81499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.031015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCG TGTGGGATGA CACGCTCGCG CACCCGGTGC GTGGGCGGGA TCGTGAACTC GCGACTTTGA CCGGGCTTCT CGACAACACC TCCGGCCGAA GAGGCACCGG AATGGTTGTC GTGGGGGCCC CGGGGACGGG CAAGACCACC CTGCTCAACG CGCTCGTCGA ACACGCCGAA GGGTTCCAAG TCCTGTGGGC CGAGGGCAGC GCGGCCGAGT CCGATGTCCG TTTCGCCGGT GTCGAGCAGT TGTTGAGACC GCTCGAGTCC TTGGTGTCAC TCCTGCCGGA TGACCGTGGC CGCGCATTGC GACCGGTATG GGGACTGCCC GCCGACGATG AGGGACAGGT CGGTTCACTC GCGGTACCGG CGGCCGTCTC CGCGCTGCTC GGCCTGGCCG CTCGTCGACA GCCCGTCCTG TGCTGTGTCG ATTCGGCCCA CCTGTTGGAC AGCGCGTCCC TGTCCGCTCT CGCCTTCGCC GCACGCCGCG CTCACCACGC CGGTGTGGTC TTCGTGTTCG CCGTCGACTG TACGGCCGAC ACCGAGGTGG ACACGGAGAC GTCGGTGTGG GGCGAACTTC CTCGGTTACG GCTCGGCCGG CTGGACGACG AGGCCGCGCA CGCGCTGTTG CGTGACCGGC TCGGCGCGTC CCTGCCGCAC GACCTCGCCG ATTCCCTGCT CGACGTCGGA CACGGCAATC CCCTCGCCCT GGTCGAACTC GCCGAGAGTC TGACACCGGA GCACCTGTGC GGAAGGGCGG CTCCGCCTTC GTCCCCGCCT CCCGAGGGGA GGCTGTGCCG TACGCTCGGA CACCGGCTGT CGGCTCTGTC CGAGGGAGCA CGCGAGGTGG TGGCGCTCGC CGGGATATCC GAGGGATTGG ACGAACAGCT CACCTGTCGG GTGCTGCCCC ATCACAGGTC GACGCTGGCC GAGGCCGTCC GCTCGGGGCT GGTGGTCCTC GACGGCGACA CGGTCCGGAC CGCGGCGGAC ACCGTGCCCT CCGCACTGCT CGCGGCCTTG ACCCCGCAGG ACATCGTCCA AGCGCACCAC CGCATGGCCG AGGCCGCGGA GGCGGTCGGA GACCGGGACC GCGCCGTGTG GCATCGGGCG GCGATCGCCA TGGCCCCCGA TCCGGCTCTC GTGGCGGACC TGGACGACAT CGCGGAGCGC GCCCGCGCCG CGGCGGCCCA CGCCACGGCC GCAGCGGCGA GTGAACGAGC GGCGGCCCTG ACCTCGGACA CGAAGGAACG CGCCCGCCGT CTCGTGGCGG CGGCCACGGA CCACTGGGCT TCGGGGCGTC CGCAGCGAGC GCGCACCGCG TTGCGGCTCG CCGCCCCACT CTCCGACAGC GTTCTGGGCG CGCGGGTCAG CAGGCTGGCG GGTGAGATCG AACTGCGCCG GGGTGACCCC TCCGTGGCCG CTACCAAACT CATCTCCACC GCACGACAGC TGGCGTCCAC GCATCGCACG CTCGCCGCGA GCGCACTCAT GTTGGCCGGT GAGGCGAGTT TCGTGGCGGG GGACAACGCG CGGTACTGCC TCACCGCGAA GGACGCCGCC CTCCTCTGCG GCCCGGAGGA ATGGCCGGCC ACGCGGGTGG TGCGCGAGCA CTTCACCGCC ATGTCGGCGA CCTTCCGAGG GGAGCACAGT GCCGCGGCGG CGCCGCTGCG CAGCCTCGTC GAACTCGGCG AGACGACGCC CGATCCGACC GCGAAGACCC TCGCGAGCCA GGCCGCCTTC ACCCTCGGCG ACGCCGAACG ATCCCGGGAC CTCGCGCTCC AGGCCGTCGT GTGCGCCCGT GCCCGCGGCG ACGAGTCGGG GGTGCCGTGG GCCTTGGTGT ACGCGGCGTT GTCGGCGTTG TTGTCCGGGC AACTCTCCGC CGCGTCCACC ACCGCGTTGG AGGGACTTCA GGTGGCGCGT TCGTTGGGGC AGTCCAATTC GGCCGTCGAT CATGTCACCG TGCTCGCCAT GTTGGCCGCG TTGCAGGGCG ATGAGGAAAC CGCCCTGCAA CGGCTGCAAG CCGCGAACAC GGAGCTCGCC GAACGTGGAC TGGGCCGTCC GAGCGCACTG GCGACCTGGG CGGCTGCCTG TGTGGACCTC GCCCATGACC GGCCCGCCGA GGCCTTCGAT CGATTCCGCA GGATGACGGT GGGCCGATCC CGCCACTGCG TGCCGCTTCG GGTGATGGCG GTGCCGCATT TCGTCGAGGC CGCCGTGCGG TGCGGGGAGA AGGAGGTGGC CCGACGTTCC CTGGTGACGT TCGAGCACTG GGCCAACACC ACGGGAGGCA CCGCTCGGGT CGCCTTGGCC CATCGCTGCC ATGCGTTGCT CGCCGAGCAG GACGGTGAAG CGCAGGAGCG GTTCACCGAG GCGGTCCGCT TGCACCGCGA GGCCGACGCA CCTTACGACC TGGCTGTCAC CCAGCTGCTG TACGCCTCCC ACCTGCGGCG CTCCCGCAGG CCCAAACAGG CCCGGGAACT GCTGCGGGAA GCCGTCCAGT TGTTCGACGA CCTCGGTGCC ACGCACTGGG TGGAGCGGGC CTCGCAGGAA CTGCGTGCCT GCGGCCACCC GGGACGGGGC AAACCCCACC TGTCCCGGGG GTTGAGTCCA CAGCAGGAAC GCATCGCGCA GCTTGTGGCC GACGGCGCCA CGAACAAGGA GATCGCCACG CAACTGTTCA TCAGTCATCG CACGGTGGAT CACCATCTGC GCAACATCTT CGCCAAGCTC GACGTGCGTT CCCGCGTGCA GCTGGCGGCC CTCTTCCGGT GA
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Protein sequence | MLAVWDDTLA HPVRGRDREL ATLTGLLDNT SGRRGTGMVV VGAPGTGKTT LLNALVEHAE GFQVLWAEGS AAESDVRFAG VEQLLRPLES LVSLLPDDRG RALRPVWGLP ADDEGQVGSL AVPAAVSALL GLAARRQPVL CCVDSAHLLD SASLSALAFA ARRAHHAGVV FVFAVDCTAD TEVDTETSVW GELPRLRLGR LDDEAAHALL RDRLGASLPH DLADSLLDVG HGNPLALVEL AESLTPEHLC GRAAPPSSPP PEGRLCRTLG HRLSALSEGA REVVALAGIS EGLDEQLTCR VLPHHRSTLA EAVRSGLVVL DGDTVRTAAD TVPSALLAAL TPQDIVQAHH RMAEAAEAVG DRDRAVWHRA AIAMAPDPAL VADLDDIAER ARAAAAHATA AAASERAAAL TSDTKERARR LVAAATDHWA SGRPQRARTA LRLAAPLSDS VLGARVSRLA GEIELRRGDP SVAATKLIST ARQLASTHRT LAASALMLAG EASFVAGDNA RYCLTAKDAA LLCGPEEWPA TRVVREHFTA MSATFRGEHS AAAAPLRSLV ELGETTPDPT AKTLASQAAF TLGDAERSRD LALQAVVCAR ARGDESGVPW ALVYAALSAL LSGQLSAAST TALEGLQVAR SLGQSNSAVD HVTVLAMLAA LQGDEETALQ RLQAANTELA ERGLGRPSAL ATWAAACVDL AHDRPAEAFD RFRRMTVGRS RHCVPLRVMA VPHFVEAAVR CGEKEVARRS LVTFEHWANT TGGTARVALA HRCHALLAEQ DGEAQERFTE AVRLHREADA PYDLAVTQLL YASHLRRSRR PKQARELLRE AVQLFDDLGA THWVERASQE LRACGHPGRG KPHLSRGLSP QQERIAQLVA DGATNKEIAT QLFISHRTVD HHLRNIFAKL DVRSRVQLAA LFR
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