| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27860 |
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| Symbol | |
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| ID | 8388110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 3017059 |
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| End bp | 3017559 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976817 |
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| Product | peptide deformylase |
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| Protein accession | YP_003134594 |
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| Protein GI | 257056762 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0522307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATGC GTGACCTGCG ATACTTCGGC GATCCGGTGC TGAAGTCGCC CGCGGACCCG
GTGACGACGT TCGACGACTC GATTCGAGCG CTGGTGGACG ACCTGCTCGA CACGGTGAAC
CTCCCCGGTC GGGCCGGACT GGCGGCGCCC CAGATCGGCG TGGGACTGCG CGCCTTCAGC
TACAACGTGG ACGGCTCCAT CGGCTACGTG CTCAACCCCG AGCTCGTCGA GTTGTCCGAG
GAGAAGCACG AGGTCATGGA GGGTTGCCTG TCCCTTCCCG GGCTGTCGTT CACCACGGTG
CGGGCCCAGC GGGCGACGGT CAAAGGGGTG GATCTGCGCA ACGAGCCGGT CACCGTGTCC
GGTTCGGGAT TGCTGGCTCA GTGCCTGCAA CACGAGGTCG ATCACCTCGA CGGCCTGTTG
TACATCGACC GTCTCGAGCC GCAGCAGCGG AAGCAGGCGC TGCGCGAGGC CAGGGGCAAA
GACTGGTTCT GGTCGCGTTA G
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| Protein sequence | MVMRDLRYFG DPVLKSPADP VTTFDDSIRA LVDDLLDTVN LPGRAGLAAP QIGVGLRAFS
YNVDGSIGYV LNPELVELSE EKHEVMEGCL SLPGLSFTTV RAQRATVKGV DLRNEPVTVS
GSGLLAQCLQ HEVDHLDGLL YIDRLEPQQR KQALREARGK DWFWSR
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