| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27760 |
|---|
| Symbol | |
|---|
| ID | 8388100 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 3002494 |
|---|
| End bp | 3003336 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644976807 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003134584 |
|---|
| Protein GI | 257056752 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0429463 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCA CTGACCGTTC CCAGCGGACC ATGGGTCCGG AGGATGGCGT CGGCAAGCAA
TCCGTGCGGA CACGCGTGGC ACTGCCCCAG CGCACTCTCC GCACCGACCG GTGGTGGCTC
CCGCCGCTGC TCACCACGTT GGGGCTGGCC GCATTCGTGG TGTACGCGAC GATTCGTTCC
TTCATGCGGG AGGGATACTG GGACGCCGAG AACCACTACC TCACGCCGTT CTACTCACCG
TGCCTGAGCA CGTCCTGCGT GCCGGGGTCG AGCCACTTCG GCACGCCGAT CGGGGAGCTG
CCCGAGTTCA TCCCGTTGGC GTTCTTGTCG CTGCCGTTCC TGCTGGGGTT CCGCCTCACC
TGTTACTACT ACCGCAAGGC GTACTACCGC TCGGTGTGGT TCGCGCCTCC GGCGTGCGCG
GTGACCGAAC CCCACGCCCG GTACACCGGG GAGACGCGGC TGCCCCTCAT CGTGCAGAAC
GTCCACCGGT ACTTCTTCTA CGTCGCACTG AGCATCACGT TGATCAACAC CTATGACGCG
ATCGTGGCGT TCGGTGGTGA GCGCGGGCTC GGCATCGGGC TCGGCAACGT GATCCTGCTG
GGCAACGTTG TCATGCTGTG GTGCTACACC TTGTCCTGCC ACTCGTGCCG GCATGTCACC
GGCGGCAGGC TCAAGCACTT CTCGAAGAAC CCGGTCCGGT ACTGGATCTG GACACAGGTC
AGCAAGCTCA ACGTTCGGCA CATGCAATTC GCGTGGATCA CGCTGGGCAC GCTCGTCCTC
ACCGATCTCT ACGTGTGGCT GGTGTCCACC CAGACGATTC CCGATCTGCG CTTCGTCAAC
TGA
|
|---|
| Protein sequence | MTSTDRSQRT MGPEDGVGKQ SVRTRVALPQ RTLRTDRWWL PPLLTTLGLA AFVVYATIRS
FMREGYWDAE NHYLTPFYSP CLSTSCVPGS SHFGTPIGEL PEFIPLAFLS LPFLLGFRLT
CYYYRKAYYR SVWFAPPACA VTEPHARYTG ETRLPLIVQN VHRYFFYVAL SITLINTYDA
IVAFGGERGL GIGLGNVILL GNVVMLWCYT LSCHSCRHVT GGRLKHFSKN PVRYWIWTQV
SKLNVRHMQF AWITLGTLVL TDLYVWLVST QTIPDLRFVN
|
|---|
| |