| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27740 |
|---|
| Symbol | |
|---|
| ID | 8388098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | - |
|---|
| Start bp | 2999752 |
|---|
| End bp | 3000507 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644976805 |
|---|
| Product | fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | YP_003134582 |
|---|
| Protein GI | 257056750 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.288724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTACC GGGCGAAACT GCGGGTCTGG CGTGGGGATG ACGGGGCCGG TGAACTGCGG
GACTACACCG TCGAGGCCAA CGAGGGTGAG GTCGTGCTCG ACCTGATCCA CCGACTGCAA
GCCACCCAGG CGCCGGATCT GGCCGTACGG TGGAATTGCA AGGCGGGCAA ATGCGGTTCC
TGCTCGGCGG AGGTCAACGG TAGGCCGCGC CTGCTGTGTA TGACGCGGTT GTCGGCCTTC
GGCGAGGACG AGGTCATCAC CGTGACGCCG ATGCGCACGT TCCCGGTGGT GCGTGACCTC
GTCACCGATG TGTCCTACAA CTACGTCAAG GCGCGGGAGA TCCCGGCGTT CACCCCACCA
CCCGAGCTGG GACTGGGTGA GTACCGCATG CAGCAGGTCG ATGTGCAGCG GTCACAGGAA
TTCCGCAAAT GCATCGAATG TTTCCTGTGC CAGAACGTCT GCCACGTGAT CCGGGACCAC
GAGGAGAACA AACCCGCCTT CGCCGGGCCG CGGTATCTCA TGCGGATCGC GGAGCTGGAG
ATGCACCCAC TCGACGCGGC CGATCGTGTG AACGAGGCGC AGACCGAGCA CGGACTCGGC
TACTGCAACA TCACCAAGTG CTGCACTGAG GTGTGCCCGG AGAACATCCA CATCACCGAC
AACGCGCTCA TCCCCATGAA GGAGCGTGTC GCCGACCGTC GTTACGACCC GGTGGTGTGG
CTGGGGAACA AGCTGTTCCG GCGAGGTGAA CGCTAG
|
|---|
| Protein sequence | MGYRAKLRVW RGDDGAGELR DYTVEANEGE VVLDLIHRLQ ATQAPDLAVR WNCKAGKCGS
CSAEVNGRPR LLCMTRLSAF GEDEVITVTP MRTFPVVRDL VTDVSYNYVK AREIPAFTPP
PELGLGEYRM QQVDVQRSQE FRKCIECFLC QNVCHVIRDH EENKPAFAGP RYLMRIAELE
MHPLDAADRV NEAQTEHGLG YCNITKCCTE VCPENIHITD NALIPMKERV ADRRYDPVVW
LGNKLFRRGE R
|
|---|
| |