| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27720 |
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| Symbol | |
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| ID | 8388096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2998114 |
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| End bp | 2998761 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644976803 |
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| Product | amino acid ABC transporter membrane protein |
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| Protein accession | YP_003134580 |
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| Protein GI | 257056748 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.63353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.398775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTAC TGCTGGACAA CCTCGACCTG TACGGGCCGG GTTTTCTCAA CACCATCAAA
CTGTTCGTCT TCTCGGCGAT CGGCTCGTTG GTGCTGGGCA CAATCCTGGC AATGCTGCGT
GTGAGCCCGG TGCCGATTCT GCGTGCCGCG GGGGCGGCCT ACGTGACGTT GTTCCGTAAC
ACGCCGCTGA CGCTGCTGTT CTTCTTCTTC GTCTTCGCCT TCCCGCTGCT GGACGTCGTC
GAGCTGTCGT ACTTCTGGGC CGCCGTCGTG GCGCTGACCA TGTACACGGC CGCGTTCGTG
TGCGAGGTCG TGAGGTCGGG CATCAACACC GTGCCGGTCG GCCAGGCCGA GGCCGCGCGC
GCGATCGGCC TCACGTTCGG GCAGACGTTG AGCCACATCG TGTTGCCCCA GGCGACCCGT
TCCGTGGTGC CGCCGATGGT CAGCACGATG ATCGCGCTGT TGAAGAACAC CACCATCGCG
GCCGGGTTCT CGGTCGTAGA GGCGGGAGCG ATCCAGAACT ACCTGTCCGA GCGCGGGTAC
AGCGTCTTGG TCGGGTTGCT GTGGGTGGCT CTCGGCTTCG TCATCCTGAT CACCCCCATG
ACTCTGCTGC AACGCAGTCT CGAGAAGCGC TGGAGCGTGG CCCGATGA
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| Protein sequence | MDVLLDNLDL YGPGFLNTIK LFVFSAIGSL VLGTILAMLR VSPVPILRAA GAAYVTLFRN
TPLTLLFFFF VFAFPLLDVV ELSYFWAAVV ALTMYTAAFV CEVVRSGINT VPVGQAEAAR
AIGLTFGQTL SHIVLPQATR SVVPPMVSTM IALLKNTTIA AGFSVVEAGA IQNYLSERGY
SVLVGLLWVA LGFVILITPM TLLQRSLEKR WSVAR
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