| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27630 |
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| Symbol | |
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| ID | 8388087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2988757 |
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| End bp | 2990010 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976794 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003134571 |
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| Protein GI | 257056739 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGGG ACACGCTGTG GCGCCATCGC GACTTCCGCC TGCTGTGGGC GGGTCAGACG
GCCAGTCAGT TCGGCACCTT CGTCGGTGTG ACCGTGCTTC CCGTCCTCGC GGTCACGACC
CTGGCCGCGA CACCTCTGGA GATGGGACTG CTGACCGCCG CCGAGAACGC CGCGTTCCTC
CTGTTGGGCC TCCCCGCGGG GGTGTGGGTG GATCGGATGC GCCGCAGACC GCTCATGGTG
CGTGCCGACC TCATCCGAGG ACTGCTGTTG CTGACGATCC CACTCGCCTG GTGGGCCGGA
GCGTTGACAC TGGTTCACCT GGTCACCGTG GCCACGCTGG TGGGCGCCTG CACGGTCTTC
TTCGACATCG CGTACCAGTC GTACCTGCCG TCACTGGTGG GACGGGGAAA GCTGGTGGAC
GGCAATGCGA AGCTCCAGGT CAGCCAGTCG GTCGCCAATG TCGGCGGCCC CGGGCTGGCC
GGTACGCTCA CCCACTTGCT CGGTGCCGCC AACGCATTGG CCACCGTCGG TGGAAGTTAT
CTGGCGTCGG CATGGTTCCT GCGTCGTATC CGGACCGAAG AACCCCCGCC GACCCCGCAC
GCCGGTCAAC CGGGTCTGCG TGCGCAGGTG GCCGAGGGGC TGCGGTTCGT GTTCACCACT
CCCTCACTGC GGGCCATCAC GCTGTGCACC GCCTCGGCGA ATTTCGCGGG CGGCATGTTC
ACCGCGGTGG AGGTACTGTT CTTGACCCGC GAACTGCACC TGTCCCCCGC CGGTGTCGGC
TGGCTGCTCG CCTGCCACGG AGTCGGTGGC GTCCTCGGCG CGGTCACCGC GGGCCGACTA
CTGGAACGCG TCGGTCTCGT CCGTGCCATC TGGCTGGTAC CACTGGTGAC CTGGCCCGCC
CAGCTGCTCG TACCACTGTC CGAACCGGAC TGGCGCATCG CCCTCGCCGC GGTGGCGTTC
GTGATCGTCA GCTACGGGAT CATCGTCTAC AACGTCGCAC AGGTCAGCTA TCGCCAGACC
CTCTGCCCCG ACCACCTGCT GGGCCGCATG AACGCCAGCG TGCGGTTCCT CATCTGGGGA
GTGCTGCCGA TCGGAAGCCT GCTCGGTGGT GTGGCAGGAC AGTGGTTGGG CGTATCGGCG
ACCGTGTGGC TGTGCTCGGC GGGCAACGTC CTGGCCCTGT TGTGGGTGTT GCTGTCCCCG
CTGCGCCGCA CCCCGGACCC GGTGCCACCG AGTACCCGCC CGGTGGCCAG CTGA
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| Protein sequence | MPGDTLWRHR DFRLLWAGQT ASQFGTFVGV TVLPVLAVTT LAATPLEMGL LTAAENAAFL
LLGLPAGVWV DRMRRRPLMV RADLIRGLLL LTIPLAWWAG ALTLVHLVTV ATLVGACTVF
FDIAYQSYLP SLVGRGKLVD GNAKLQVSQS VANVGGPGLA GTLTHLLGAA NALATVGGSY
LASAWFLRRI RTEEPPPTPH AGQPGLRAQV AEGLRFVFTT PSLRAITLCT ASANFAGGMF
TAVEVLFLTR ELHLSPAGVG WLLACHGVGG VLGAVTAGRL LERVGLVRAI WLVPLVTWPA
QLLVPLSEPD WRIALAAVAF VIVSYGIIVY NVAQVSYRQT LCPDHLLGRM NASVRFLIWG
VLPIGSLLGG VAGQWLGVSA TVWLCSAGNV LALLWVLLSP LRRTPDPVPP STRPVAS
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