Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27490 |
Symbol | |
ID | 8388073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2969892 |
End bp | 2971073 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976780 |
Product | deacetylase, histone deacetylase/acetoin utilization protein |
Protein accession | YP_003134557 |
Protein GI | 257056725 |
COG category | [B] Chromatin structure and dynamics [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCT CGGCCGTTGT CTGGGATTCC GCCCTCCTCG CCTACAACTT CGGTAGCGAC CACCCGTTCA ATCCCGTGCG CCTGGACCTG ACGGTCCGAT TGGCCACCGC GCTCGGCGTG TTGCAGGACG TGCCGCTGCT GGTACCGGAC CCGGTGCAGG CCGAAGAGCT GTACCGCGCA CACACCGCTG AATACGTGGA GGCGGTCAAA CAGGCGCCGA TGGCGGGCTG GGACGTCGGT TACGGCTTGG GCACACCCGA CAACCCCGTG TTCACCGACA TGCACGAAGC CTCGTCACTC GTGGTCGGTT CGACGCTGTT GGGGGCGCGA TGCATCGCGG AGGGTAAGGC GCGAAGGGCG GTGAACATCG CGGGCGGCCT GCATCACGCG ATGCGGGACC GTGCCTCGGG GTTCTGCGTC TACAACGACT GTGTCGTGGC GATCTCCTGG CTGCTCGACC ACGGTTTCGA CCGCATCGCC TACATCGACA CCGACGTGCA CCACGGTGAC GGCGTGCAAG CCGCCTTCTA CGGTGATCCG CGCGTGCTCA CCGTCTCGTT GCATCAACAT CCGTTCACGT TGTTTCCCGG CACGGGCTAC TCGGGTGAGA TCGGGGAAGG GGAGGCGGAG GGCAGAGCGG TCAACATCCC CCTGCCGCCG CAGACCGGGG ATGCGGGATG GTTGCGGGCT TTCCACGCCG TGGTGCCGTC GGTGTTGGCG GCGTTTCGCC CGCAGCTTTT GGTGACGCAA TGCGGTGTGG ACTCGCACGA GGAGGACCCG CTGGCCGATC TGTCGCTGAC GGTGGACGGG CATCGGGCCA TCTACCGGAC GTTGCGGGAA CTCGCGGACA CCCATGCCGA AGGGCGATGG TTGGCCGTGG GCGGTGGTGG TTACCAGTTG ATCCGGGTCG TGCCGCGGTC GTGGACACAT CTGTTGGCGA CGGTGTTGGA TCGGGACGTG GACCCGAGGA CACCGTTGCC CAGAGCGTGG ACCGAGCAGG TGCTGGCGAT GGCGCCCGGG GCGGAGGTGC CCACGAGTAT GACCGAGAGT TCAGATGGTG CGGAGCCGGT CTTCTCACGC TGGGGCGACG GTTCCGGCGA CCCCGTGGAC AGTGCCGTCA GGGATACGCG CCGTGCCGTG TTCCCGATGT ACGGACTGGA CCCCGACGAT CCGAGGGACT GA
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Protein sequence | MSSSAVVWDS ALLAYNFGSD HPFNPVRLDL TVRLATALGV LQDVPLLVPD PVQAEELYRA HTAEYVEAVK QAPMAGWDVG YGLGTPDNPV FTDMHEASSL VVGSTLLGAR CIAEGKARRA VNIAGGLHHA MRDRASGFCV YNDCVVAISW LLDHGFDRIA YIDTDVHHGD GVQAAFYGDP RVLTVSLHQH PFTLFPGTGY SGEIGEGEAE GRAVNIPLPP QTGDAGWLRA FHAVVPSVLA AFRPQLLVTQ CGVDSHEEDP LADLSLTVDG HRAIYRTLRE LADTHAEGRW LAVGGGGYQL IRVVPRSWTH LLATVLDRDV DPRTPLPRAW TEQVLAMAPG AEVPTSMTES SDGAEPVFSR WGDGSGDPVD SAVRDTRRAV FPMYGLDPDD PRD
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