Gene Svir_27230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27230 
Symbol 
ID8388047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2938327 
End bp2939277 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content69% 
IMG OID644976755 
Productexopolyphosphatase 
Protein accessionYP_003134532 
Protein GI257056700 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.104101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.765571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTGC TCGACGTGGG GAGCTTCAGT GCGCGACTGC TGGCGGTGAA CCGTGAGGGT 
TCACTTCTGG ACCCGGTGTT GAGCCACAAA ACCCGGCTCC GACTCGACCG TGCTCTCGAC
GCTTCGGGGA ATCTGCGACA GGAGGGTGTG GACGCCGTCG TCTCCGCCGT ACGCGTGGCG
GACGAGGTCG CGCGGCAGCA CGGTATCCAC GACTTCTTCT GTCTGGCCAC CTCGTCGATC
CGCGACGCCC GCAACAGCGC AGAAGTGGTC GCCCACGTCG AATCGGAAAC GGGGCGGACG
TTGCGTTTCC TCCCCGGAGC GGAGGAGGCC CGGCTGTCCT ACCGGGCGGC GCGTTCATGG
TTCGGCGCGG GCGCGGGACC GTTGTCCGTG CTCGACATCG GAGGGGGGAC GCTGGAACTG
GCCGCGGGTC GCGGCATCCA CGCCGACTTC GCTCGGTCGT TGCCGCTCGG TGCTCGCGAG
ATGATGCGGA CATGGCGGCT TGACACCGAT CGTCCCTCGG AACACGCGAT CGCGGCGTTG
CGCGCCCATG CCATCGGTCG GATTCGGGAG GCGCTGGGCC GGGACGAAGC CCGGTTGAAG
GGTTTCCGCG CCGTGGGGTG TTCGAAGGTG CTGCGTCAGC TTGCGGTCTT GGCCGGGCGG
CGTCGCAAGG GGCTCGGCAA GACCAGGGAG TTGCACGTCG AGGACATCCG GCGTTGGATT
CCCCGACTGG CGCAGTTGCC CGCGTCGCGC CGTGCCGAGC TACCCGGCAT CTCCCGACCC
CGTGCCCGTC AGGCGTTGGC AGGAGCCGTC GTCGCCGAAG CCCTGTTGAC CGTGTTCGAC
GGTCCCGTGG TGATCTGCCC TTGGTCCACC ACCCACGGAC TGTTGCTGTC GCTGTTGCAG
GAACCCGACG GGCTGCGGGA GCGGTCCGGT CGACGGGCCA CGGCCGCTTG A
 
Protein sequence
MAVLDVGSFS ARLLAVNREG SLLDPVLSHK TRLRLDRALD ASGNLRQEGV DAVVSAVRVA 
DEVARQHGIH DFFCLATSSI RDARNSAEVV AHVESETGRT LRFLPGAEEA RLSYRAARSW
FGAGAGPLSV LDIGGGTLEL AAGRGIHADF ARSLPLGARE MMRTWRLDTD RPSEHAIAAL
RAHAIGRIRE ALGRDEARLK GFRAVGCSKV LRQLAVLAGR RRKGLGKTRE LHVEDIRRWI
PRLAQLPASR RAELPGISRP RARQALAGAV VAEALLTVFD GPVVICPWST THGLLLSLLQ
EPDGLRERSG RRATAA