| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_27140 |
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| Symbol | |
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| ID | 8388038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2928800 |
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| End bp | 2929600 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976746 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003134523 |
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| Protein GI | 257056691 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.967922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCCTG ACGAGCAATC CCGCGTAGAG AAGCGCAAGC AAGCAGGAGG CTCAGCAGGT
TACGAGGACT TGTCTCCTTT GTTCAACGCA CTGGCCGCCC TGGATCCGGA CGACCCTCAG
CGTGTGACCT TGCGTGAGGA GATCATCACT CGTTGTCTCC CGCTCGCTGA ACACATCGCC
CGCCGCTTCG TCGGCCGCGG TGAACCACGC GATGACCTGG TGCAGGTCGC CAGGCTAGGA
CTGCTCAACG CCATCGACCG GTTCGACGCC TCCCGCGGAA CCGAATTCGT CGCCTTCGCC
GTACCCACGA TCATGGGCGA GGTCCGTCGG CACTTCCGCG ACTCCAGTTG GGCCGTACGG
GTACCTCGGC GGCTGAAGGA ACTGCACCTG TCACTGAGCC AGGCCAGCAG CAAACTCGCC
CAGCGCCTCG GCAGAGCGCC GACGCCGAGT GAACTGGCCG CCGAACTCGG CCTCAGCCCC
GAGGACGTGT GGGACGGACT ACTCGCGGGC AACGCCTATC AGTCGGTCTC GATGGACGCC
GCCTACGACG ACGAGGGCAC GCTGCCCCTG GCCGAGACGG TCGGTCACGA CGACGTGGAA
CTGGAGCACG TCGAATACCA CGAATCGCTG CAACCACTGC TGGCGAGCCT GCCCGAACGG
GAGCGGCGGG TACTGATCCT GAGGTTCTTC GGCAACATGA CGCAGACCCA GATCGCCGAA
CGCGTGGGGA TCTCCCAGAT GCACGTGTCC CGGTTACTCG CACGCACGCT CGAATTCCTG
CGCAGCCAGC TCACCGAGTG A
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| Protein sequence | MTPDEQSRVE KRKQAGGSAG YEDLSPLFNA LAALDPDDPQ RVTLREEIIT RCLPLAEHIA
RRFVGRGEPR DDLVQVARLG LLNAIDRFDA SRGTEFVAFA VPTIMGEVRR HFRDSSWAVR
VPRRLKELHL SLSQASSKLA QRLGRAPTPS ELAAELGLSP EDVWDGLLAG NAYQSVSMDA
AYDDEGTLPL AETVGHDDVE LEHVEYHESL QPLLASLPER ERRVLILRFF GNMTQTQIAE
RVGISQMHVS RLLARTLEFL RSQLTE
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