Gene Svir_27120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_27120 
Symbol 
ID8388036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2928031 
End bp2928435 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content67% 
IMG OID644976745 
Productanti-anti-sigma factor 
Protein accessionYP_003134522 
Protein GI257056690 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAC GGACGGAAGG TGGCGACCGA ATGGTTCGCA TGCGTGATGA CCTCGACATA 
CGAGTCGACG AACCGGCCAC GGGACTGGTC ATCGTCAGGG TCGCCGGCGA GATCGACATC
CTCGGAGCGC CGCTGCTACG GCAGTGTGTC GACGACCGTC TTCCCGGGGC CTGTGCCTTC
GTCCTCGACC TGAGCGGTGT CACTTTCTTC GGTGCGGCGG GGATTTCGGT GCTCGTCGAG
GCCTCCGCCG CGGCGGAGCG GCTCCGCGTG AACTGGGCCC TGGCGTGTCC TCCCGCCGTG
CTGCGGCCGT TGCAGGTCAC CGACCTCGCT CGCCGGCTGC CGGTGTGTTC GGAATTCCCC
GAAGCCGTTC GTGTGGCTAC GGCAGCTTCA CCCGTCCTGT CGTGA
 
Protein sequence
MAVRTEGGDR MVRMRDDLDI RVDEPATGLV IVRVAGEIDI LGAPLLRQCV DDRLPGACAF 
VLDLSGVTFF GAAGISVLVE ASAAAERLRV NWALACPPAV LRPLQVTDLA RRLPVCSEFP
EAVRVATAAS PVLS