Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_27120 |
Symbol | |
ID | 8388036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2928031 |
End bp | 2928435 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644976745 |
Product | anti-anti-sigma factor |
Protein accession | YP_003134522 |
Protein GI | 257056690 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAC GGACGGAAGG TGGCGACCGA ATGGTTCGCA TGCGTGATGA CCTCGACATA CGAGTCGACG AACCGGCCAC GGGACTGGTC ATCGTCAGGG TCGCCGGCGA GATCGACATC CTCGGAGCGC CGCTGCTACG GCAGTGTGTC GACGACCGTC TTCCCGGGGC CTGTGCCTTC GTCCTCGACC TGAGCGGTGT CACTTTCTTC GGTGCGGCGG GGATTTCGGT GCTCGTCGAG GCCTCCGCCG CGGCGGAGCG GCTCCGCGTG AACTGGGCCC TGGCGTGTCC TCCCGCCGTG CTGCGGCCGT TGCAGGTCAC CGACCTCGCT CGCCGGCTGC CGGTGTGTTC GGAATTCCCC GAAGCCGTTC GTGTGGCTAC GGCAGCTTCA CCCGTCCTGT CGTGA
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Protein sequence | MAVRTEGGDR MVRMRDDLDI RVDEPATGLV IVRVAGEIDI LGAPLLRQCV DDRLPGACAF VLDLSGVTFF GAAGISVLVE ASAAAERLRV NWALACPPAV LRPLQVTDLA RRLPVCSEFP EAVRVATAAS PVLS
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