| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26820 |
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| Symbol | |
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| ID | 8388006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2888610 |
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| End bp | 2889749 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976716 |
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| Product | ABC-type Na+ efflux pump, permease component |
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| Protein accession | YP_003134493 |
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| Protein GI | 257056661 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.749324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.452605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCA CCACGCAGGA TCCGCAGCAC CGCATCGGTG ACGCGAGTGA ACGGGCCGGG
AAAGGGACGT CGTTCGCCGC CGCGACATGG TTGGTGGCCG AGCGGGAGAT CAAGTCGTTC
GTCCGGACGA AGGGTTTCTG GATCGGCTTC AGCGTGATCA TCGTGGCCCT GTTCGCGACC
TCCATCCTGC CGAAGGTGTT CGCGAGCAGC ACGAGCGTCG CCGTGGTGGA CTCCTCGGCG
AACGCGGTGT TGGAGCAGGC CGAGATCGAG GTCGTCTCCG TGACCGATGT CGCCGCCGCG
GAGGACCTCG TCCGCGAGGA GGAGGTCGAC GCCGCCGTGG TGCCGGACCC CACGGGGGAG
TCGGTCACGG GGGTGCGAGT GATCGCGTTG TCGTCCCCGC CCTCGGAGGT CGTCGCGGCG
CTGGGCACGA CCCCGCCCGT GGACCTGTTG GAGGAGTCCG AGGTCGGACA CGGGGAACGA
ACGCTGGTCA TCATGGCGTT CGCGCTCCTG TTCCTCATGT TCGGTATCGG CGGGGTCGCC
ATCGCGCAGA GCGCGGTGAC GGAGAAGCAG ACCCGCATCG TCGAGATCCT CGTGGCGACG
GTTCCGGTCC GGGCGCTGCT CGCGGGCAAG ATCCTGGGAC ATGCGCTGCT GACGCTCGGT
CAGGTCGTCG TGGTGGCGAT CGCGGCGCCG ATCGCGGTGC GGCTGGGTGA CCACGGAGAA
CTGGTGACGG TGCTGCTGCC CGCGCTCGGC TGGTTCGTGC CGTTCATGTG TCTGGGCTTC
CTGCTGCTGG CCGCGATGTG GGCGGTGTCG GGGGCGGTCG TGAGCAGGCA GGAGGACCTG
GGCTCGAGCA TGAGTTTCGT GATGTTGCTC GTCATGGGCC CCTACTTCGC CGTGTTGATG
CTGTCGGACA ACGCGACGGC GATGACCGTG CTGTCGTTCG TGCCCTTCTC GGCGCCCGTG
GCGATGCCGG TACGGGCGTT CACCGAGGAT GCGCAGCCCT GGGAGGCGCT GGCGTCCCTG
GGCGTGCTCG CGGCCTCGGT CGTGGTGATC ACCGTGCTCG CGGCTCGGTT GTACTCGGGT
GCGTTGCTGC AGACGAAAGG CAAGGTCGCC TTGACGAAGG CGTGGGCACG CGCGGAATGA
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| Protein sequence | MSVTTQDPQH RIGDASERAG KGTSFAAATW LVAEREIKSF VRTKGFWIGF SVIIVALFAT
SILPKVFASS TSVAVVDSSA NAVLEQAEIE VVSVTDVAAA EDLVREEEVD AAVVPDPTGE
SVTGVRVIAL SSPPSEVVAA LGTTPPVDLL EESEVGHGER TLVIMAFALL FLMFGIGGVA
IAQSAVTEKQ TRIVEILVAT VPVRALLAGK ILGHALLTLG QVVVVAIAAP IAVRLGDHGE
LVTVLLPALG WFVPFMCLGF LLLAAMWAVS GAVVSRQEDL GSSMSFVMLL VMGPYFAVLM
LSDNATAMTV LSFVPFSAPV AMPVRAFTED AQPWEALASL GVLAASVVVI TVLAARLYSG
ALLQTKGKVA LTKAWARAE
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