Gene Svir_26730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26730 
Symbol 
ID8387997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2880118 
End bp2880963 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content64% 
IMG OID644976707 
Productp-hydroxycinnamoyl CoA hydratase/lyase 
Protein accessionYP_003134484 
Protein GI257056652 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.358608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.184188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAGA GCGCCGAGGA ACCGTGGGGC AACACCGTTC TCGTCGAGTT CGACGAGGGC 
ATCGCGTGGG TGTCGCTGAA CCGCCCGGAC AAGCGCAACG CGATGAACCC GACGTTGAAC
GACGAGATGG TCCGCGTGCT GGACCATCTG GAAGGGGACG ACCGCTGCCG AGTCCTGGTG
CTCACCGGTG TCGGTGAGGC CTTCTCCGCC GGTATGGACC TCAAGGAGTA CTTCCGTGAC
GTCGACGAGG TCGGCGACTA CACCTTGCAA CTGCGGGTGC GGCGGGCGAG CGCGGAGTGG
CAGTGGAAGC GATTGGCCAA GTGGAGCAAG CCGACGATCG CCATGGTCAA CGGCTGGTGC
TTCGGCGGTG CTTTCACTCC GCTCGTGGCG TGTGACCTGG CCTTCGCCGA CGAGAACGCC
CAATTCGGAC TGTCCGAAAT AAACTGGGGC ATCCCCCCGG GTGGTGTGGT GACACGTGCG
CTCGCCGCGA CGATAAGCCA GCGTGACGCG CTGTACTACA TCATGACGGG GGAACGGTTC
GACGGTCGCA AGGCCGAGCA ACTGCGCTTG GTGAACGAAG CGTTGCCCAC CGAACGACTG
CGCGAACGCA CCCGTGAGGT GGCGTTGAAA CTGGCCGCCA CGAACCGGGT CGTGCTGCAC
GCGGCCAAGA TGGGCTACAA GGTGGGCGGC GACATGCCGT GGGAACAGGC GGAGGACTAC
CTCTACGCCA AGCTGGAGCA GTCCCAGCTG CTCGACCGGA ACCATTCGCG GGCCAAGGGG
CTCAAGCAGT TCTTGGACGA CAAGTCCTAC CGTCCGGGGC TTGAGTCCTT CGATCCGGCC
AAGTGA
 
Protein sequence
MGQSAEEPWG NTVLVEFDEG IAWVSLNRPD KRNAMNPTLN DEMVRVLDHL EGDDRCRVLV 
LTGVGEAFSA GMDLKEYFRD VDEVGDYTLQ LRVRRASAEW QWKRLAKWSK PTIAMVNGWC
FGGAFTPLVA CDLAFADENA QFGLSEINWG IPPGGVVTRA LAATISQRDA LYYIMTGERF
DGRKAEQLRL VNEALPTERL RERTREVALK LAATNRVVLH AAKMGYKVGG DMPWEQAEDY
LYAKLEQSQL LDRNHSRAKG LKQFLDDKSY RPGLESFDPA K