Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_26730 |
Symbol | |
ID | 8387997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2880118 |
End bp | 2880963 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644976707 |
Product | p-hydroxycinnamoyl CoA hydratase/lyase |
Protein accession | YP_003134484 |
Protein GI | 257056652 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.358608 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.184188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGCAGA GCGCCGAGGA ACCGTGGGGC AACACCGTTC TCGTCGAGTT CGACGAGGGC ATCGCGTGGG TGTCGCTGAA CCGCCCGGAC AAGCGCAACG CGATGAACCC GACGTTGAAC GACGAGATGG TCCGCGTGCT GGACCATCTG GAAGGGGACG ACCGCTGCCG AGTCCTGGTG CTCACCGGTG TCGGTGAGGC CTTCTCCGCC GGTATGGACC TCAAGGAGTA CTTCCGTGAC GTCGACGAGG TCGGCGACTA CACCTTGCAA CTGCGGGTGC GGCGGGCGAG CGCGGAGTGG CAGTGGAAGC GATTGGCCAA GTGGAGCAAG CCGACGATCG CCATGGTCAA CGGCTGGTGC TTCGGCGGTG CTTTCACTCC GCTCGTGGCG TGTGACCTGG CCTTCGCCGA CGAGAACGCC CAATTCGGAC TGTCCGAAAT AAACTGGGGC ATCCCCCCGG GTGGTGTGGT GACACGTGCG CTCGCCGCGA CGATAAGCCA GCGTGACGCG CTGTACTACA TCATGACGGG GGAACGGTTC GACGGTCGCA AGGCCGAGCA ACTGCGCTTG GTGAACGAAG CGTTGCCCAC CGAACGACTG CGCGAACGCA CCCGTGAGGT GGCGTTGAAA CTGGCCGCCA CGAACCGGGT CGTGCTGCAC GCGGCCAAGA TGGGCTACAA GGTGGGCGGC GACATGCCGT GGGAACAGGC GGAGGACTAC CTCTACGCCA AGCTGGAGCA GTCCCAGCTG CTCGACCGGA ACCATTCGCG GGCCAAGGGG CTCAAGCAGT TCTTGGACGA CAAGTCCTAC CGTCCGGGGC TTGAGTCCTT CGATCCGGCC AAGTGA
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Protein sequence | MGQSAEEPWG NTVLVEFDEG IAWVSLNRPD KRNAMNPTLN DEMVRVLDHL EGDDRCRVLV LTGVGEAFSA GMDLKEYFRD VDEVGDYTLQ LRVRRASAEW QWKRLAKWSK PTIAMVNGWC FGGAFTPLVA CDLAFADENA QFGLSEINWG IPPGGVVTRA LAATISQRDA LYYIMTGERF DGRKAEQLRL VNEALPTERL RERTREVALK LAATNRVVLH AAKMGYKVGG DMPWEQAEDY LYAKLEQSQL LDRNHSRAKG LKQFLDDKSY RPGLESFDPA K
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