Gene Svir_26500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26500 
Symbol 
ID8387974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2858192 
End bp2858695 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID644976688 
Productphenylacetate-CoA oxygenase, PaaJ subunit 
Protein accessionYP_003134465 
Protein GI257056633 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.4071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.146126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACCG CCGTACAGAC CGCCCGCCGG GTGGCGGAGA CGGTGGCCGA CCCGGAACTG 
CCGATGCTCA CGTTGGCCGA TCTGGGTGTG CTGCGTGAGG TGTGGGAGGA GGACGGCACG
ATCATCGTGT CGATCACCCC CACCTACACC GGATGTCCCG CGCTCGACAC CATGCGCGAC
GATCTCGTCC ACGCCCTCCA GCGGGCCGGG TACCCCCGGG TCGAGGTGCG CACGGTGCTG
CGCCCCGCGT GGTCCAGTGA CTGGATCACA GCAGAGGGGC GTCGCAAACT CGCCGAGGCC
GGGATCGCCC CGCCCGGCCG GGCACGGCGC CACGGTTCGG GCCCGGTGCC GCTCACGTTG
GTCCCACCCC CGTCCCGCGT GCGGTGTCCG CGATGCGGTT CGACGGACAC CGAGGAGGTG
TCGCGGTTCA GCGCCACCGC GTGCAAGGCA CTACGTCGGT GCCACGCGTG CCGGGAACCC
TTCGAACACG TCAAGGAGAT CTAG
 
Protein sequence
MVTAVQTARR VAETVADPEL PMLTLADLGV LREVWEEDGT IIVSITPTYT GCPALDTMRD 
DLVHALQRAG YPRVEVRTVL RPAWSSDWIT AEGRRKLAEA GIAPPGRARR HGSGPVPLTL
VPPPSRVRCP RCGSTDTEEV SRFSATACKA LRRCHACREP FEHVKEI