Gene Svir_26450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26450 
Symbol 
ID8387969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2851902 
End bp2852636 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID644976683 
Productubiquinone/menaquinone biosynthesis methylase 
Protein accessionYP_003134460 
Protein GI257056628 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.765571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATGT TGCACCATGA CGGGCTGCGC CGTGCGGCCG TTCCGGCCGC CTTCGACGAC 
GGGGCACGCA GTTACGACCG ACTGGTCGGG CTCAACCCGG GCTATCACGC GCATCTGCGG
CTTTCCGCCG AGCGGCTCCG GCTCCCCGGG GACGGTGCGG GCCTACGACT GCTCGACGCC
GGTTGTGGGA CCGGTGCGTC CACCGCCGCG CTGCTGGCTG TCGCACCGCG CGCCGAGATC
GTCGCCATCG ACGCGTCGGC GCGCATGTTG GCCGAGGCGC GGCGTAAGCC GTGGCCGGAC
TCGGTGCGTT TCGTCCACAC CAGCGTCGAG GAGCTCGCCG GCGTGTCCGG GCCCTTCGAC
GGCATCCTCG CCGCGTACCT CGTGCGTAAT CTCGCCGATC CCGATGCCCA GCTTCGTGCG
CTGGCCCGGC TGCTGCGTCC GGGGGCGACG CTGGCCGTGC ACGAGTACTC GGTGCGCGAT
TCGGTAATGG CGACCATGGT GTGGCACGCC GTGTGTTGGG GCGTGATCAT CCCGCTGGGA
TGGTTGTTCG ACGGGGACAC CACGCTGTAT CGGCACCTGT GGCGCAGTGT CACGACGTTC
GACGGCGTGA CCCGGTTCCG GCGCAGGCTC GCCGACGCCG GGTTCACCGC GATCCACAGC
GAGACGATGA CCGGCTGGCA GCGGGGTGTG GTGCACACCT TCCTGGCGAG CGTGCGTGGG
AGCGGGTGTG ACTGA
 
Protein sequence
MSMLHHDGLR RAAVPAAFDD GARSYDRLVG LNPGYHAHLR LSAERLRLPG DGAGLRLLDA 
GCGTGASTAA LLAVAPRAEI VAIDASARML AEARRKPWPD SVRFVHTSVE ELAGVSGPFD
GILAAYLVRN LADPDAQLRA LARLLRPGAT LAVHEYSVRD SVMATMVWHA VCWGVIIPLG
WLFDGDTTLY RHLWRSVTTF DGVTRFRRRL ADAGFTAIHS ETMTGWQRGV VHTFLASVRG
SGCD