Gene Svir_26400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26400 
Symbol 
ID8387964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2847395 
End bp2848195 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID644976678 
Producthypothetical protein 
Protein accessionYP_003134455 
Protein GI257056623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.597608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGTG ACGGTTCCGG TGCGGTGGAG GGTCGAAGAA GCGACCTGGT GCGTGCGGTG 
GCGTTGCTGG CCGCGGTCGT CCTGCAGGCG GTGGCCGGGG CGATCGGCGG CAGTGGTGCG
TGGGGTGAGC CCGTGGGTTC GGTGGCGAAC TCCTATCCCA CCTTGATCCT GCCGGGCGGT
GGGGCTTTTT CGATCTGGAC TCTCATCTAC GTGTTGAGCA TCGTCCTGGC GGTGCGGGCG
GCCCTTCCCC GACAGCGGCG GCGCGAGGTG CACCGCGGCG TCGGATGGTG GCTCGTCGCG
GCCGGTGTGT TGAACGCCGC ATGGGTCGTC GCGTTCACCC AACGGTGGCT CGTGCTCGCC
GAGGCGATCA TCGTCGCGCT TCTCGTCGTG CTCTGCACCG CTTGGGTGAA GGTGACGGGT
CATCCTGCCG GAGGGTGGGC GGATCGGCTG CTCCTGCACA CGCCGATCGG TGTCTACGTG
GGCTGGGTCG GTGTCGCGAC CGTGTCCGGT GCGGCGAGCA CCGGTGTGGC GTTGGGGATC
ACGCCACCTC CTTCCGTGTC CGTGCCCCTC GCGGTGCTGG CGGTCCTCGG GACCGCGGTG
GCCGCCGTGG TCGCCGTGGT GTGGTTCTTC GCGGTCCTCG GTTTCGCCGC CGCCGTCGCG
TGGGCTCTGG CGTGGATCGC GGTCGCGACC CCGTCGTGGC CGGTGGCCGC GGCGGCGATC
GTGGGGGTGC TGTCCGTGGT GTCCGCGGCC GTTCTGTCGT TCTGGCGTTC GAGGGACCGG
GTTCGGGCGG CCTGGGGCTG A
 
Protein sequence
MRRDGSGAVE GRRSDLVRAV ALLAAVVLQA VAGAIGGSGA WGEPVGSVAN SYPTLILPGG 
GAFSIWTLIY VLSIVLAVRA ALPRQRRREV HRGVGWWLVA AGVLNAAWVV AFTQRWLVLA
EAIIVALLVV LCTAWVKVTG HPAGGWADRL LLHTPIGVYV GWVGVATVSG AASTGVALGI
TPPPSVSVPL AVLAVLGTAV AAVVAVVWFF AVLGFAAAVA WALAWIAVAT PSWPVAAAAI
VGVLSVVSAA VLSFWRSRDR VRAAWG