Gene Svir_26350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26350 
Symbol 
ID8387959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2841370 
End bp2841996 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content66% 
IMG OID644976673 
Productdihydrofolate reductase 
Protein accessionYP_003134450 
Protein GI257056618 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.595114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA CCGCCACCAC GTGGATCACC GTCGACGGTG TGATGCAGGG ACTCGGTGCC 
CCGGACGAGG ACCGTAGGGG CGGGTTCGAA CGCGGTGGAT GGGCCATGCC GCTGTACGAC
GACGAGGCCG CGACGTTTCT GAACCGGGTC TACCAGCGCG CCGACGCGTT CCTGTTCGGC
CGGCACACCT ACGAGATCTT CGCCGGATAC TGGGGAGCGA TGGTCGATCC GAACAATCAC
CCCATCGCGG CGGCGTTGCA CACCAAGCCC AAATACGTAG CGTCGACCAC GCTCACCGAC
CCGACGTGGG TCGACACCAC AGTCCTCTCC GACGACCTCG CGACCACCCT CGCGGACCTG
AAGGTCACGC GGGAAGGCGA GCTGCAGGTG CACGGCAGCG GCGTCCTCGT TCGTTGGTTA
CTGGCCAACC AGCTCGTCGA CGAGATCACC TTGCTGGTCT GTCCCGTGAT CGTCGGCCAA
GGGAGGCGAC TGTTTCCCGA CACCGGCCCG GACACGGCGC TTGATCTGGT GGAATCGCGA
ACCACCCCGA AGGGGGTGAC GATCCAGAGC TACCGACCCA TCGGTCGACC GCAGTACGCC
GTGGCCGCGC CGAACCCCAA CACGTGA
 
Protein sequence
MKLTATTWIT VDGVMQGLGA PDEDRRGGFE RGGWAMPLYD DEAATFLNRV YQRADAFLFG 
RHTYEIFAGY WGAMVDPNNH PIAAALHTKP KYVASTTLTD PTWVDTTVLS DDLATTLADL
KVTREGELQV HGSGVLVRWL LANQLVDEIT LLVCPVIVGQ GRRLFPDTGP DTALDLVESR
TTPKGVTIQS YRPIGRPQYA VAAPNPNT