| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26290 |
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| Symbol | |
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| ID | 8387953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2835826 |
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| End bp | 2837151 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976667 |
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| Product | regulator of polyketide synthase expression |
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| Protein accession | YP_003134444 |
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| Protein GI | 257056612 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCAC GCCTGAAACG ACGTTTGGTC TCGAACGACA CCCCGAAGGC CGCGGAGATC
CGGGCCCTCG TGGTCTGCGT CGCCGAACGT CTCCAGGCGC GACACACCGA ACTCAACGAC
AGCATGAACG CCGCGATCGA AGGCGCCATC GCGGACCTGG CCAACCCCGA ACTGACCGAG
ATGTTGCACG CCAGCGTCGA GGGCAACATC ACCACGATCC TGCACATGCT GCGCAACGAC
ATCCCGATCG AACACCTCCA GCCGGCGACC GCGGCGACGG AGTACGCCAT CCGACTGGCC
CGCGCGGGTG TGTCCGCGGC CCCGCTGCGG CGGGCGTACC ACATCGGTTC GGACGACCTG
CTCGCCGAGA TCTTCCACGA GATCCAGCTG TTGGACTGCC CGTCGGAACT CAAACTGCGC
CTACTGCACC ATCTGGCCGG GTGGCTGCAC CACTACGTCG ACTGGATCAC CCGGGTGGTG
CTCGACGCCC ATGAGGCGGA ACGACAGACG TTGCTGAAGC AGCACGCCAC CGACATCTTC
CGGCTCGTGC ACCGGGTGCT CGACCGGGAG CCGGTCGAAT ACGACCAGTT CGCCCGCACC
GCGGGTTACC GCCTCAACCA TCCGCACGTG GCCACGGTGC TTTGGGACGA ACGAACGCTG
CAGGCCGCCG ACCAGATCGA GGTCCTCCGG TCGTTGGCGA CTCGACTCGC CCGTGTGCTG
GGAAGTTCGA GTGATCCTTT GTTCATGCCG GTCGACCGCA GCACCGCCTG GGTGTGGTGC
CACATCCCGG ATGCGACCTC GCCGATCGAC ACGGCCCGGG TGCACGAGGT GTTGGCGGAC
GCCCCGGCCG TGCGGGCCGC GATGGGCACC CCCGTGTTCG GGATCGAGGG GTTTCGCCGA
ACCCTGGAAC AGGCCAACGC CGTCCGCACC GTCGCCAGCG CCAGTGGCGC CCCGCATGCG
AAGGTGATGT CCTACGGCGA CGACGGTATG GCCGTCGTCG CGATGCTGGT CCGAGACCTT
CCGGCCAGTC GGCGGTGGGT CGCCGACACC CTCGGCGCGC TGGCCCTCGA CACCGAGCCC
GCGGCCCGGC TGCGGGAGAC CCTGCTGACC TTCCTCCGCA CCGGCAGTTA CGTCGAAACC
TCCAAGAAGC TCATGTTGCA TCGCAACACC GTGAAGTACC GGCTGACCAA GGCGAAGCGG
GAACGAGGCC GCCCACTGAC CGAGGGCCGG CTCGATCTCG AACTCGCCCC ACACCTGTGT
CACGTGCTCG GTCCGGCGGT ACTGCAACAA CCACGGAGGG CGGCGGAACC CGAATCACCG
AACTGA
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| Protein sequence | MTARLKRRLV SNDTPKAAEI RALVVCVAER LQARHTELND SMNAAIEGAI ADLANPELTE
MLHASVEGNI TTILHMLRND IPIEHLQPAT AATEYAIRLA RAGVSAAPLR RAYHIGSDDL
LAEIFHEIQL LDCPSELKLR LLHHLAGWLH HYVDWITRVV LDAHEAERQT LLKQHATDIF
RLVHRVLDRE PVEYDQFART AGYRLNHPHV ATVLWDERTL QAADQIEVLR SLATRLARVL
GSSSDPLFMP VDRSTAWVWC HIPDATSPID TARVHEVLAD APAVRAAMGT PVFGIEGFRR
TLEQANAVRT VASASGAPHA KVMSYGDDGM AVVAMLVRDL PASRRWVADT LGALALDTEP
AARLRETLLT FLRTGSYVET SKKLMLHRNT VKYRLTKAKR ERGRPLTEGR LDLELAPHLC
HVLGPAVLQQ PRRAAEPESP N
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