Gene Svir_26270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26270 
Symbol 
ID8387951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2832552 
End bp2834399 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content64% 
IMG OID644976665 
Producthypothetical protein 
Protein accessionYP_003134442 
Protein GI257056610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTCA AGACTCCGGA CATGCCTCCG GTGAAACCGG AGGAATTCGA ATCCACACCG 
GTCATGGAAA GAATCCGGAC ACTGGCGACG CATTGGGCGG AATACGGCTT CGGCGGACCG
AAGCAAATGC ATTTGCTCTA TCTGGTGAAG ACCGTTCTGT TCGTGGTCGG CGGCTGGCTC
GTCGTCGGTT CGACCACTCC GGGGATCAGT CTGTTCGACC TCGGCGGCTG GTGGGGCGAG
CTCATCGTCT ATCAGAAGCT CATGGTGTGG ACGGTGCTGT GGGAGATCAC CGGACACGCC
GCGTCCTGGG GTCCACTGGC CTTCAAATTC GGCCCCATGC TCGGCGGCTG GCGGTACTGG
GCCAGAGTCG GCACCCTCCG GCTTCCGCCC TACCCGGACA AGGTTCCCGG AACCCTCGGC
GACCACCGCA CCGTCTTCGA CGTCGGCCTC TACCTGCTGA TCCTGGCCAC CCTGCTGTTC
CTGCTGCTCA CCCCCGGCAG CCACGGCGGA GCCGCCTACA GCGAGGCCGG TCTCCTCCCG
GGTTGGGCGC TGCTCACCTA CGTCGCGCTC ATCCTGATCA TGGGGTTCCG CGACCGGGTC
GTGTTCCTGG CCTCACGACC CGAACAGTAC GCCGTGTGCC TGCTGGCCTT CGGTGTCCTG
ACGGACCACG TCGACATGGT GCTCGTCGCC AAGATCGCCA TGGTCACCAT CTGGTTGGGC
GCCGGTGTCT CCAAGTTCGG GCGCCACTTC AGCCTCGTCG TCCAGGCGAT GCTGAGCAAC
ACCCCCTGGC TGACATCCCG GCGGTTCAAA CGATCGCTCT ACAGGAACGC ACCGAACGAC
CTGCGTCCGT CGAAGATGGC GTTCGCGTGG GCACATCTGG GTGGCACGGT CGTGGAGTTG
GTCCTGCCGT TGGTGCTGCT GTTCTCGGTG AACGAGACCC TGACCTGGCT GGCGATCGCC
GGCATGATGC TGTTCCACCT CTTCATCTAC TCGACGTATC CGCTGGCCGT CCCCCTCGAG
TGGAACATCT TCTTCATATT CGTCACGCCG TTTCTGTTCG GTGGTTTCTT CGCGGACGAC
GGGTACGGCA TGTCCGACTT CAGCAGTCCC TGGATTCCCG CCGCCGCGCT GGTGCTCTAC
CTGACGGGTC CGATTCTGGG GAACCTGAAG CCCGAGTGGG TGTCTTTTCT GGTCTCCCTG
CGGCAGTATT CCGGAAACTG GGCATCAGGG ACGATGGCGT TCCGGATGAA CGACGCGGAG
GACAAGCTCG ATAAGGGATT GGTCAAGAGT TTGCAGACCC AGCGACAGCA ACTGCTCGCC
CTCTACGGCT CCGACGTGGC GGAGATCTTC CTCCAGAAGT GCGTGGCCTT CCGCAGCATG
CACAGCCACG GCCGGATGCA CCTGTCGCTG CTGCAACGAC ACCTCGACGC GCTCGAGAAC
TACCGTCTGC GCGAAGGCGA GGTGGTCTGC ACCGTGCTCG TCGGCTGGCA ATCCGGTGAC
GGGCACCTGT TCGACGAACG CACGATCGCG ATGGTGCAGA AACGCTGCAA CTTCGAGCCC
GGAGAATTCG TGATGGCGTG GACCGAATCG CAGCCGATAC ACAAGAAGAC CGTGCAGTAC
AAGGTCGTCG ACGCCGCCCT CGGTGTCGTC GAGCGCGGCT ACTACCACGT CCGGGACGCG
GTGGCCGAAC AGCCGTGGCT CCCGAACGGA CCGATTCCGC ACCGGGTGAC CTGGCGGCTG
CCCGGCTATG AGCCGGCCGG GAACCTCCCC CACCCGGCGC CGAGGTCCGC GGACTCCACC
CGATCCGACC GTTCGGACGA CCGGCCCGAC GACAAGGTCG GTTCATGA
 
Protein sequence
MGFKTPDMPP VKPEEFESTP VMERIRTLAT HWAEYGFGGP KQMHLLYLVK TVLFVVGGWL 
VVGSTTPGIS LFDLGGWWGE LIVYQKLMVW TVLWEITGHA ASWGPLAFKF GPMLGGWRYW
ARVGTLRLPP YPDKVPGTLG DHRTVFDVGL YLLILATLLF LLLTPGSHGG AAYSEAGLLP
GWALLTYVAL ILIMGFRDRV VFLASRPEQY AVCLLAFGVL TDHVDMVLVA KIAMVTIWLG
AGVSKFGRHF SLVVQAMLSN TPWLTSRRFK RSLYRNAPND LRPSKMAFAW AHLGGTVVEL
VLPLVLLFSV NETLTWLAIA GMMLFHLFIY STYPLAVPLE WNIFFIFVTP FLFGGFFADD
GYGMSDFSSP WIPAAALVLY LTGPILGNLK PEWVSFLVSL RQYSGNWASG TMAFRMNDAE
DKLDKGLVKS LQTQRQQLLA LYGSDVAEIF LQKCVAFRSM HSHGRMHLSL LQRHLDALEN
YRLREGEVVC TVLVGWQSGD GHLFDERTIA MVQKRCNFEP GEFVMAWTES QPIHKKTVQY
KVVDAALGVV ERGYYHVRDA VAEQPWLPNG PIPHRVTWRL PGYEPAGNLP HPAPRSADST
RSDRSDDRPD DKVGS