Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_26270 |
Symbol | |
ID | 8387951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2832552 |
End bp | 2834399 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644976665 |
Product | hypothetical protein |
Protein accession | YP_003134442 |
Protein GI | 257056610 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTTCA AGACTCCGGA CATGCCTCCG GTGAAACCGG AGGAATTCGA ATCCACACCG GTCATGGAAA GAATCCGGAC ACTGGCGACG CATTGGGCGG AATACGGCTT CGGCGGACCG AAGCAAATGC ATTTGCTCTA TCTGGTGAAG ACCGTTCTGT TCGTGGTCGG CGGCTGGCTC GTCGTCGGTT CGACCACTCC GGGGATCAGT CTGTTCGACC TCGGCGGCTG GTGGGGCGAG CTCATCGTCT ATCAGAAGCT CATGGTGTGG ACGGTGCTGT GGGAGATCAC CGGACACGCC GCGTCCTGGG GTCCACTGGC CTTCAAATTC GGCCCCATGC TCGGCGGCTG GCGGTACTGG GCCAGAGTCG GCACCCTCCG GCTTCCGCCC TACCCGGACA AGGTTCCCGG AACCCTCGGC GACCACCGCA CCGTCTTCGA CGTCGGCCTC TACCTGCTGA TCCTGGCCAC CCTGCTGTTC CTGCTGCTCA CCCCCGGCAG CCACGGCGGA GCCGCCTACA GCGAGGCCGG TCTCCTCCCG GGTTGGGCGC TGCTCACCTA CGTCGCGCTC ATCCTGATCA TGGGGTTCCG CGACCGGGTC GTGTTCCTGG CCTCACGACC CGAACAGTAC GCCGTGTGCC TGCTGGCCTT CGGTGTCCTG ACGGACCACG TCGACATGGT GCTCGTCGCC AAGATCGCCA TGGTCACCAT CTGGTTGGGC GCCGGTGTCT CCAAGTTCGG GCGCCACTTC AGCCTCGTCG TCCAGGCGAT GCTGAGCAAC ACCCCCTGGC TGACATCCCG GCGGTTCAAA CGATCGCTCT ACAGGAACGC ACCGAACGAC CTGCGTCCGT CGAAGATGGC GTTCGCGTGG GCACATCTGG GTGGCACGGT CGTGGAGTTG GTCCTGCCGT TGGTGCTGCT GTTCTCGGTG AACGAGACCC TGACCTGGCT GGCGATCGCC GGCATGATGC TGTTCCACCT CTTCATCTAC TCGACGTATC CGCTGGCCGT CCCCCTCGAG TGGAACATCT TCTTCATATT CGTCACGCCG TTTCTGTTCG GTGGTTTCTT CGCGGACGAC GGGTACGGCA TGTCCGACTT CAGCAGTCCC TGGATTCCCG CCGCCGCGCT GGTGCTCTAC CTGACGGGTC CGATTCTGGG GAACCTGAAG CCCGAGTGGG TGTCTTTTCT GGTCTCCCTG CGGCAGTATT CCGGAAACTG GGCATCAGGG ACGATGGCGT TCCGGATGAA CGACGCGGAG GACAAGCTCG ATAAGGGATT GGTCAAGAGT TTGCAGACCC AGCGACAGCA ACTGCTCGCC CTCTACGGCT CCGACGTGGC GGAGATCTTC CTCCAGAAGT GCGTGGCCTT CCGCAGCATG CACAGCCACG GCCGGATGCA CCTGTCGCTG CTGCAACGAC ACCTCGACGC GCTCGAGAAC TACCGTCTGC GCGAAGGCGA GGTGGTCTGC ACCGTGCTCG TCGGCTGGCA ATCCGGTGAC GGGCACCTGT TCGACGAACG CACGATCGCG ATGGTGCAGA AACGCTGCAA CTTCGAGCCC GGAGAATTCG TGATGGCGTG GACCGAATCG CAGCCGATAC ACAAGAAGAC CGTGCAGTAC AAGGTCGTCG ACGCCGCCCT CGGTGTCGTC GAGCGCGGCT ACTACCACGT CCGGGACGCG GTGGCCGAAC AGCCGTGGCT CCCGAACGGA CCGATTCCGC ACCGGGTGAC CTGGCGGCTG CCCGGCTATG AGCCGGCCGG GAACCTCCCC CACCCGGCGC CGAGGTCCGC GGACTCCACC CGATCCGACC GTTCGGACGA CCGGCCCGAC GACAAGGTCG GTTCATGA
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Protein sequence | MGFKTPDMPP VKPEEFESTP VMERIRTLAT HWAEYGFGGP KQMHLLYLVK TVLFVVGGWL VVGSTTPGIS LFDLGGWWGE LIVYQKLMVW TVLWEITGHA ASWGPLAFKF GPMLGGWRYW ARVGTLRLPP YPDKVPGTLG DHRTVFDVGL YLLILATLLF LLLTPGSHGG AAYSEAGLLP GWALLTYVAL ILIMGFRDRV VFLASRPEQY AVCLLAFGVL TDHVDMVLVA KIAMVTIWLG AGVSKFGRHF SLVVQAMLSN TPWLTSRRFK RSLYRNAPND LRPSKMAFAW AHLGGTVVEL VLPLVLLFSV NETLTWLAIA GMMLFHLFIY STYPLAVPLE WNIFFIFVTP FLFGGFFADD GYGMSDFSSP WIPAAALVLY LTGPILGNLK PEWVSFLVSL RQYSGNWASG TMAFRMNDAE DKLDKGLVKS LQTQRQQLLA LYGSDVAEIF LQKCVAFRSM HSHGRMHLSL LQRHLDALEN YRLREGEVVC TVLVGWQSGD GHLFDERTIA MVQKRCNFEP GEFVMAWTES QPIHKKTVQY KVVDAALGVV ERGYYHVRDA VAEQPWLPNG PIPHRVTWRL PGYEPAGNLP HPAPRSADST RSDRSDDRPD DKVGS
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