Gene Svir_26250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26250 
Symbol 
ID8387949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2829958 
End bp2830323 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content67% 
IMG OID644976663 
Productpredicted membrane protein 
Protein accessionYP_003134440 
Protein GI257056608 
COG category[S] Function unknown 
COG ID[COG2149] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGG AACGTGTGGA AGTCTCCGCC GTCGAGCGTG ACGAGGAACC CGATTATCGG 
TTCTCGTTGG CCAATGAGCG TACGTTCCTC GCCTATCTAC GGACGGCCCT CGCGCTCGAT
GCCGGTGCAC TCGCGGTGGT CCAGTTGTTG CCCGACGTCG CGAGTATGCC GGTTCGGCAG
ATCTGCGCGG TCGTGCTCGG CACGCTCGGT TGTGTGCTGT CGGTGGCCGC CTACCGACGG
TGGGCGGCGA ACCAGCGGGC GATGCGGAAG GGGGCACCGT TGCCGAGGTC GCGGGTGATG
GCGACGTCGG CGGTCGTCGT CGCCTGCGCG TCGCTGGTGG CGGTGCTGTT GGTGGCGCTG
TCATGA
 
Protein sequence
MNMERVEVSA VERDEEPDYR FSLANERTFL AYLRTALALD AGALAVVQLL PDVASMPVRQ 
ICAVVLGTLG CVLSVAAYRR WAANQRAMRK GAPLPRSRVM ATSAVVVACA SLVAVLLVAL
S