Gene Svir_26230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26230 
Symbol 
ID8387947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2828639 
End bp2829577 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID644976661 
Producthypothetical protein 
Protein accessionYP_003134438 
Protein GI257056606 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGG TGAGGCGAAA CTGCTGCGCG CCGTCGGCCG GACGGCCCAA CAGCGCCCCG 
TCCACATCCG GCGCCGACGG AAGCACCGAG GGGATGGTGC TGCTGCCCGG CGGCGAGTTC
TCGATGGGCA GTGAGGACCC GCTGGCCTAC CCGGAGGACG GCGAGGGCCC TGTGCGGACG
GTGCGGCTGG ACCCGTTCTG GATCAGTCGC ACCGCCGTGT CCAACCGGGA CTTCGCCGAG
TTCGTCGACG CCACCGGTTA CCGCACGGAG GCCGAACGGT GGGGCTGGTC GTTCGTCTTC
GCCGGGTTGC TCCCGGACGA CTTCCCGCCC ACGCGCGGTG TCGCGACGGC ACCGTGGTGG
CGTCAGGTCG AGGGTGCCGA TTGGCGGCAC CCCGAAGGAC CTCACTCCAC TGTGGATGGT
CGAGAGGATC ATCCGGTGGT CCACGTGTCG TGGTCCGACG CGCAGGAGTA TTGCGCCTGG
GCCGGACTGC GGCTTCCGAC CGAGGCCGAA TGGGAATACG CCGCACGGGG CGGGTTGAGC
GGGAACCCGT TCCCGTGGGG CGCCGAGCTG GAACCGGGCG GGGAACACCG GATGAACGTC
TGGCAGGGGG TCTTTCCCCG GCACAACAGC CGCGCCGACG GTTGGTACGG CACCTGTCCG
GTCACCGAGT TCCCGCCCAA CGGGTTCGGC CTGCACAACA TGACCGGCAA CGTGTGGGAA
TGGTGCGCCG ACTGGTTCCA CCCCACGTTC CACACCCTGG ACCGGCGGAC GAATCCCCGG
GGACCGGAAC AGGGCACGCA CCGCAGTGCC CGTGGCGGTT CCTATCTCTG CCACGAGTCC
TACTGCCGTC GCTACCGGGT TTCCGCCCGG CAGGGTCTCA CGCCGGACAC CACCACCGGC
AACGTCGGGT TCCGATGCGT CCGCGACGCA GCACCGTGA
 
Protein sequence
MTEVRRNCCA PSAGRPNSAP STSGADGSTE GMVLLPGGEF SMGSEDPLAY PEDGEGPVRT 
VRLDPFWISR TAVSNRDFAE FVDATGYRTE AERWGWSFVF AGLLPDDFPP TRGVATAPWW
RQVEGADWRH PEGPHSTVDG REDHPVVHVS WSDAQEYCAW AGLRLPTEAE WEYAARGGLS
GNPFPWGAEL EPGGEHRMNV WQGVFPRHNS RADGWYGTCP VTEFPPNGFG LHNMTGNVWE
WCADWFHPTF HTLDRRTNPR GPEQGTHRSA RGGSYLCHES YCRRYRVSAR QGLTPDTTTG
NVGFRCVRDA AP