| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_26200 |
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| Symbol | |
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| ID | 8387944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2824153 |
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| End bp | 2825337 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976658 |
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| Product | glycine betaine/L-proline transport ATP binding subunit |
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| Protein accession | YP_003134435 |
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| Protein GI | 257056603 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCAAG CACGCAACGT GACGAAGGTG TTCGGCCTCC CGGCCGGACG AGCGCGCGAG
ATCTTGGACG AGGCCGAGGA TCGCTCCCGC GCGATCACAG CGGCCGGCGG CGTCCTGGCG
GTGGACGACG TGTCGTTCGA TGTGGCCCAA GGTGAGCTCT TCGTCATCAT GGGGTTGTCG
GGATCCGGGA AGTCGACGCT GATCCGCATG GTCAACCGAC TGGTGGAGCC GACCGCGGGA
CAGATCTACT ACGACGGAAC CGACATCGCC GCCATGGGCG AGGCGCAACT GCGCGAACTG
CGCAACAAGC GGCTGAGCAT GGTGTTCCAA CACTTCGCCC TGTTCCCGCA CCGCACCATC
CGAGACAACG CCGCGTACGG GCTCAAGACG CGGGGAGTCC CCAGGCACGA ACGACTCGAA
CGAGCCGACC AGGCACTGCA CCAGGTGGGA CTCGGGCAGT GGGGCGACGC CTATCCCGAG
GAACTCAGCG GCGGGATGCA ACAGCGCGTC GGACTGGCGC GCGCGCTGGC CACCGACCCC
GAAGTGCTGA TCATGGACGA GCCGTTCAGC GCCCTCGACC CGCTCAACCG GCGCGCGATG
CAGGAACAAC TGTTGGAACT GCAGTCCACG TTCCGTAAGA CGATCCTGTT CGTCACGCAC
GACCTCAACG AGGCCATGCG CCTCGGTGAC CGGATCATGG TGCTGCGGGG CGGCACGGTG
GTCCAGCTCG GCACGGGACC GCAGATCATC GCCCAGCCCG CCGACGAGTA CGTGCACGAC
TTCGTCTCCG ACGTCGACCG CTCCCGCGCC CTGACCGCGG GCTCGATCAT GACCGAACCG
TGGCTGACGG CGACGGTGGA CGACGACGCC GCCTCCGTGC TGGAGAAGCT CGACAGAACC
CCCGCCAAGG GGCTGTACAT CCTCGACCAG GACCACCGGG TGGTGGGGGT CGCCAGCGGG
GAGGCCCTGT CCCGCGCGGC GGCGGACGGT GAACGCGACC TGCGGCGCTG CCTCGACACC
GACTACGCCT GGGTCGCCGA GGGGACGTCA CTGGCCCGGT GTTGCCACCT CACCGGAGGT
GACGTCGTCC CGCTGGCGGT GCTCGACGCG GACAAGCACC TGCTCGGGGT CGTCCCCAAA
ACGGAGATGC TCCGCGCCAT CGCGACTCAG GAAGAGGGTG ACTGA
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| Protein sequence | MFQARNVTKV FGLPAGRARE ILDEAEDRSR AITAAGGVLA VDDVSFDVAQ GELFVIMGLS
GSGKSTLIRM VNRLVEPTAG QIYYDGTDIA AMGEAQLREL RNKRLSMVFQ HFALFPHRTI
RDNAAYGLKT RGVPRHERLE RADQALHQVG LGQWGDAYPE ELSGGMQQRV GLARALATDP
EVLIMDEPFS ALDPLNRRAM QEQLLELQST FRKTILFVTH DLNEAMRLGD RIMVLRGGTV
VQLGTGPQII AQPADEYVHD FVSDVDRSRA LTAGSIMTEP WLTATVDDDA ASVLEKLDRT
PAKGLYILDQ DHRVVGVASG EALSRAAADG ERDLRRCLDT DYAWVAEGTS LARCCHLTGG
DVVPLAVLDA DKHLLGVVPK TEMLRAIATQ EEGD
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