Gene Svir_26140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26140 
Symbol 
ID8387938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2816434 
End bp2816997 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID644976652 
Productpredicted flavoprotein 
Protein accessionYP_003134429 
Protein GI257056597 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.744413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCG CCACGATCTA CGGCAGCCCG ACGCCACCGG GCAAGCTCGC CAGGGCGCTC 
GGGCTGATCG AGGACGACGT ACGAACCCGG TATCCCACCT GGAGCGTGGA CCGGGTCGCC
CCCACGAACT CCGTCGGACC GGTGGTGGCG ACCTGGGACG AGGATGCCGT GGAGCGGATC
GGCGACGCCG ATGCCGTGGT GATCTCCTCC CCGGTGTTCC GCGGCTCCAT CACCGGAACC
TTGAAACTCC TGATCGACAT GTTGCCGAAC GAGGCGTTGC GCTCGAAACC GGTGGGCATC
CTCACCGTGG CGGCCGCCCC GCACCACTTC CTGTCCGCGG AACGGCATCT GCGTGACGTG
CTCGCCTGGT TCGGCGCCCT CGCCGCGCCC AACGCCGCTT TCTTCGTCGA CAAGACCTTC
GGGGCAGAAC ACGTCGCCGA CGACGTCGTC GAGGAACTAC GTGAGTTCGC CGACCAGGTC
GTGGTTCTGG CCGAGCAGCT GAAAGGCCGC GGATTCGGGC CCGATCCACT GACAGTCCGT
TACAGCAAGA AATCCCAGGG TTGA
 
Protein sequence
MKLATIYGSP TPPGKLARAL GLIEDDVRTR YPTWSVDRVA PTNSVGPVVA TWDEDAVERI 
GDADAVVISS PVFRGSITGT LKLLIDMLPN EALRSKPVGI LTVAAAPHHF LSAERHLRDV
LAWFGALAAP NAAFFVDKTF GAEHVADDVV EELREFADQV VVLAEQLKGR GFGPDPLTVR
YSKKSQG