Gene Svir_26090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26090 
Symbol 
ID8387933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2812601 
End bp2813185 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content66% 
IMG OID644976647 
Productpredicted transcriptional regulator 
Protein accessionYP_003134424 
Protein GI257056592 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTGC GATACGCGCT GATCGCGCTG CTCACCGGCC GTCCGATGAC CGGGTACGAC 
ATCTCGAAAA GTTTCAGCCG CTCGGTCGCG CACGTCTGGC ACGCTCCGGA CTCGCAGATC
TACCCCGAGC TCAACCGGAT GGAACGCGAC GGACTGCTCG ACTCCGTCGA GGTGCCCTGG
GGGAAGAGGG GGACCAAAAA GGAGTACCAC GTCACCGAGG CGGGACTCGC CGCGTTCCGG
GAGTGGATGG AATCCCCGCT GGTGCCGCAG CGACAACGGG ACCCCGTCTA CCTGAAGGCG
GCGTACTTCG ACTTCGCCGA CCCCGAGGCG GTGCGCGAAC AGCTACGACA ACAGCAGGCG
TACTGGGAAG AGCAGCTGGC GCTGCTCGAG CAGACCCGGG CGACCCTCGT CGACCGCAGC
CACCCCACTC TGGCGGCGAG GATCTCCAAG CTGAACGAGC GCGAGGCCGA ACTGGCCGTC
CGGTACAAGA TCTACGCCTA CGACGGACTG ATCGCCCGTG CTCGCACCGA ACTGGAGTGG
ATCAAGGACG GCTTCGCGCT GATCGACGAG CTGTACGGTC CCTGA
 
Protein sequence
MSLRYALIAL LTGRPMTGYD ISKSFSRSVA HVWHAPDSQI YPELNRMERD GLLDSVEVPW 
GKRGTKKEYH VTEAGLAAFR EWMESPLVPQ RQRDPVYLKA AYFDFADPEA VREQLRQQQA
YWEEQLALLE QTRATLVDRS HPTLAARISK LNEREAELAV RYKIYAYDGL IARARTELEW
IKDGFALIDE LYGP