Gene Svir_25970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25970 
Symbol 
ID8387921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2800958 
End bp2801401 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content66% 
IMG OID644976637 
Producthypothetical protein 
Protein accessionYP_003134415 
Protein GI257056583 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGA ACTCGTCTGA CAAGCTGATA CGCGACCTTC TCGGGGGCGT TTCCCCGGAA 
ATCGCCGAAC AGCAGCTCAA CGACAAACTC GGCGTCACCT TCGTCGATCT GACACCGGAG
CGGGTCAGCG CCACCATGCC GGTGAAGGGC AATCTTCAGC CGTACGGGTT ACTGCACGGT
GGGGCGAACG CGGCGTTGGC CGAGTCCGTC GGTTCGGTAC TGGCGGCGCT GAACGCGGGC
GTCGATCGCA TAGCGGTGGG TCTGGAGCTG TCCTGCACGC ATCATCGCGC CGCCATGTCG
GGTGTGGTCA CGGCTGTGGC CACCCCCCTG CACGTCGGGC GGAGCACCAT CACTGCGGAG
ATCGTCATCA CCAACGAGGC GGGGTGGCGG ACGTGCACGG CGCGGCTGAC GTGTGTGGTG
CGTGATCGGG TCCCGAGTCC CTGA
 
Protein sequence
MTENSSDKLI RDLLGGVSPE IAEQQLNDKL GVTFVDLTPE RVSATMPVKG NLQPYGLLHG 
GANAALAESV GSVLAALNAG VDRIAVGLEL SCTHHRAAMS GVVTAVATPL HVGRSTITAE
IVITNEAGWR TCTARLTCVV RDRVPSP