Gene Svir_25940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25940 
Symbol 
ID8387918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2796500 
End bp2797348 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID644976634 
Productubiquinone/menaquinone biosynthesis methylase 
Protein accessionYP_003134412 
Protein GI257056580 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACG CGAACTCCTC CGACCGTCAC GCCAGTGCCG AGGCCGTCCT CGGCACTGTG 
GGTGTCGCCC ATCGCCATGT GTCCTCTGCC GAGGCCAGGG CGGCCAACCT CGCCTGGTGG
GACGCCGACG CGGATGACTA CCACGATACC CACGGCGAGT TCCTGGGTGT CGCCGATTTC
CTCTGGTGTC CCGAGGGGCT GCGGGAAGCC GACGCCGGAT TGCTCGGCGA CGTCTTTGGC
GCGGACGTTT TGGAGGTGGG CTGCGGTTCG GCGCCGTGCG CCCGTTGGCT CACCGACCAG
GGCGCGCGCG TGGTGGCCTT CGACCTGTCG GCCGGCATGT TGCGACACGC CCTCGACGGC
AACCGACGCA CCGGTCTGCA TCCGGCGCTC GTCCAGGCCG ACGCCGAACA CATGCCGTTC
GTCGACGGCG CGTTCGACCT GGCGTGCTCG GCGTTCGGCG CGGTCCCGTT CGTGGCCTCC
GTGACGAAGG TGTTCAGCGA AGTCGCCCGG GTGCTGCGTC CACACGGCCG TTGGGTGTTC
TCGGTCACCC ATCCCATGCG GTGGATATTC CCCGACGATC CCGGACCCAC CGGGCTCACG
GTCACCCACT CGTACTTCGA CCGCACCCCC TACGTCGAGG TGGACGCGAA CGGCGACGCG
ACCTACGTCG AATACCACCG CACCCTCGGC GACTACGTAC GTGCGCTGCA CACGGCGGGG
TTCCGGCTCG TCGATCTGAT CGAACCCGAA TGGCCGCCCG GACATACGCG GGTGTGGGGG
CAATGGGGTC CGTTGCGCGG GAAGTTCTTC CCCGGCTCCG CGATCTTCTG CTGCGTTCGG
GATTCGTGA
 
Protein sequence
MADANSSDRH ASAEAVLGTV GVAHRHVSSA EARAANLAWW DADADDYHDT HGEFLGVADF 
LWCPEGLREA DAGLLGDVFG ADVLEVGCGS APCARWLTDQ GARVVAFDLS AGMLRHALDG
NRRTGLHPAL VQADAEHMPF VDGAFDLACS AFGAVPFVAS VTKVFSEVAR VLRPHGRWVF
SVTHPMRWIF PDDPGPTGLT VTHSYFDRTP YVEVDANGDA TYVEYHRTLG DYVRALHTAG
FRLVDLIEPE WPPGHTRVWG QWGPLRGKFF PGSAIFCCVR DS