Gene Svir_25860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25860 
Symbol 
ID8387910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2788170 
End bp2788598 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content65% 
IMG OID644976626 
Producthypothetical protein 
Protein accessionYP_003134404 
Protein GI257056572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTAG ACGTGCAGGT GACGTTCGAT GCCACCGATC CTCAGCGGTT ATCCGAATTC 
TGGGCGTTGG CACTCGATTA CGAAGTGTGG AACCCGCACG ATGGTCGCGA GCCGTGGGAG
GTCTTCGGCG TGGACCTCGG GCCTTCACGC ACGCATCGGG ACACGTGGTC GGCGGTGGTC
GATCCCGAAG GCAGGGGACC ACGAGTGCTC TTCCGAAAGG TCGCCGAGTC GAAGACGACA
GAGGGCCGGG TACACCTCAA CGTCGACGTG AGCGGTCACG GCAAAGGCAC CGAGGGGTGG
CGGAAGGTGA GGGACAAGGC CGACGCGCTG GTGGCGGCGG GAGGCACGGT GGTGCGGGAG
GTCGACGAGC CGCTCGGTCG GTGTCTGGTG ATGCGCGATC CGGAGGGAAA CGAGTTCTGT
CTCCGCTGA
 
Protein sequence
MALDVQVTFD ATDPQRLSEF WALALDYEVW NPHDGREPWE VFGVDLGPSR THRDTWSAVV 
DPEGRGPRVL FRKVAESKTT EGRVHLNVDV SGHGKGTEGW RKVRDKADAL VAAGGTVVRE
VDEPLGRCLV MRDPEGNEFC LR