Gene Svir_25830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25830 
Symbol 
ID8387907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2782937 
End bp2783947 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content63% 
IMG OID644976623 
Producttellurium resistance membrane protein TerC 
Protein accessionYP_003134401 
Protein GI257056569 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.322541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGC CCGTGTGGGT GTGGATCGCC ACGGTCGGGG GTTTGCTCCT CCTCATTCTG 
GCGGATTTGG TGATCGTCGA CCGGAAGCCC CACCAGGTGA CCGCCGGAGA GGCGGCCAGG
TGGGTGATCT TCTACGTTTC CTGCGCCGTA TTGTTCGGTG TCGGCGTCTG GATACTGGGA
GGACACGACC CCGGAGTCGA GTTCTTCACC GGCTACATCA CCGAGTACTC GCTGTCCATC
GACAACCTGT TCATCTTCAT GGTGATCATG GCCTCGTTCC GGGTGCCGGC GATCCACCAA
CATCGCGTGC TGTTGATCGG CATTCTGCTG GCCCTGGTGA TGCGCGCGGC GTTCATCGCC
GTCGGGGCCG TGCTGATCGC CAAATTCGTG TGGATCTTCT TCCTGTTCGG GGCCTTCCTC
GTGTGGACCG CCGTGAACAT GGTCCGCAGC AAGGACGAGG ACGAGGAGTA CCAGGAGAAC
GCCGTGACCC GGTGGGTGCG GCGGTTCTTC CCCGTCACGC AGGACTACGT CGGCCACAAG
ATGATCGTCA AGCAGGACGG CAAGCGCCAC CTGACCCCGA TGTTCGTGGT GATCGTGGCG
ATCGGCAGCG CCGACCTGCT GTTCGCCGTG GACTCGATTC CGGCCATCTT CGGCATCACC
CAGGACGCGT ACCTCGTGTT CACCGCGAAC GCGTTCGCGC TCATGGGGCT GCGGCAGCTG
TACTTCCTGC TCGGTGGCTT GGTGGCGAAA CTGGTCTACC TGTCGTACGG CTTGGCGGTC
ATCCTCGGCT TCATCGGTGC CAAGTTGGTG CTGCACGCGT TGCACGAGTA CGAGGTCACG
CCGTCGTGGC TGGTGATCAA CAACTGGACT TCGTTGGGCG TGATCGCCGC GGTACTGACC
ATCACCACCG TCGCGAGCCT CATCAAGTCG AAGCGGGACC CCAACGCCGT GAGTACGTTG
AATCTCCAGG CTCCCGCGAA AAGCGAGCGG GAGCCCTCGC ACGGCGGGTA G
 
Protein sequence
MSVPVWVWIA TVGGLLLLIL ADLVIVDRKP HQVTAGEAAR WVIFYVSCAV LFGVGVWILG 
GHDPGVEFFT GYITEYSLSI DNLFIFMVIM ASFRVPAIHQ HRVLLIGILL ALVMRAAFIA
VGAVLIAKFV WIFFLFGAFL VWTAVNMVRS KDEDEEYQEN AVTRWVRRFF PVTQDYVGHK
MIVKQDGKRH LTPMFVVIVA IGSADLLFAV DSIPAIFGIT QDAYLVFTAN AFALMGLRQL
YFLLGGLVAK LVYLSYGLAV ILGFIGAKLV LHALHEYEVT PSWLVINNWT SLGVIAAVLT
ITTVASLIKS KRDPNAVSTL NLQAPAKSER EPSHGG