Gene Svir_25800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25800 
Symbol 
ID8387904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2779628 
End bp2780215 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content69% 
IMG OID644976620 
Producthypothetical protein 
Protein accessionYP_003134398 
Protein GI257056566 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA TCGCGCTCGA GAACGTTTTG ACCAAGGCGG GGCTCAATGT GAAGCCCTCC 
GAGTTCTTGG CGCTGGTCGA GGATGCCGCC CGGCGGTTGA AGCCGCCGAA CCCGGAGCCG
GCACACTACC TCTCCCCCGA ACAGCGGGCC GCGCTGGAGG ACGTGGGGCT CGACCTGTCC
CCGCAGAGCG AGGACGAGCG GGACTACCGT GCTCGCACGG TCGCCGCCCA CACGGTGCTC
GCGGAATCCG CTCTCACCGT GGGGGAGGCG GCGGCGTTGC TCGGCGTCGA CGACAGCCGG
ATCCGGCACC GCCTGAAGGA ACGGCGACTC ACGGGTTGGA AGGCCCAGGG CGGATGGCGG
CTACCGAACT GGCAGTTCAC CCCCAGTGGT GTGCTGCCCG GACTCGATGT CGTCCTCCGT
GCCGTGCCGA AGGATCAACC CGCGCTCGTG GTCGCCTCCT TCATGACCAC CCCTCAGCCC
GACCTGGTGA TCAGCGGCAA GCCCGCCACG CCCAGACAGT GGCTGCTCGC CGGTGGCGAT
CCCGAGCCCG TGGCCCAGTT GGCAGCCATG CTCGGCACGC CCATCTGA
 
Protein sequence
MTTIALENVL TKAGLNVKPS EFLALVEDAA RRLKPPNPEP AHYLSPEQRA ALEDVGLDLS 
PQSEDERDYR ARTVAAHTVL AESALTVGEA AALLGVDDSR IRHRLKERRL TGWKAQGGWR
LPNWQFTPSG VLPGLDVVLR AVPKDQPALV VASFMTTPQP DLVISGKPAT PRQWLLAGGD
PEPVAQLAAM LGTPI