| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25730 |
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| Symbol | |
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| ID | 8387897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2769100 |
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| End bp | 2770662 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644976613 |
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| Product | PAS domain S-box |
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| Protein accession | YP_003134391 |
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| Protein GI | 257056559 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCGCCA TGCAGTTGGC CGTGGTGACC GTGCTGGTGC TGGGTGGCGC GATACTCGCG
TATCTCGACG CCGCCGCCGG TGTGGAACGG AAGGCCGCCG AAGAAGCCGT GGCGGTGGCG
GTCACCCTTG CCGACTCGGC GGATGTGCGT AAGGCGGTGC AGTCTCCGAA CCCCAGTTCC
CGGCTGCAAC CGTTCGCCGA GCGGGTCCGC GCCGACACGG GGGTCGGGTT CATCACGATC
ATGGATCGCG ACCGCACCCG GTACACGCAT CCGAACCCGG ACCGGATTGG TGAACCGTTC
ATCGGCAACA TCGAACCCGC TTTGCGTGGA CGCACGTTCA CCGAGACTTA CACCGGCACC
CTCGGCCCGT CGGTGCGTGC GGTCGCGCCC GTGATGGTGG ACGGCGAGGT GGTCGCGTTG
GTGGCCGTCG GGATCACCTT GGAGGCCATC TCGACGGAGC TCGCGCAACG CATGCCACCG
GTGTTGGGTG TGGCCGCCGG AGTGCTGTTG GTGGGCGTGG CCGGCAGCGT CGCGGTGAGT
AATCGCCTGC GTGCGCAGAC CCGCGGTGTG GCCCCGGACG AGTTGAGCCG CATGTTCGAC
TACTACGAGG CCATCCTCCA CTCGGTGCGG GAGGGGTTGG TGCTGGTCGA CCGGGACGGG
CGGGTCGGGT TGTACAACGA CGCCGCAGCC GAGTTGCTGG AGCTGCCCGA GAACGCGCGT
GGTGCCCCGG TGTCCGAACT CGGTTTGACG GACGCCCTTT CCCGTACGTT GCTGGCGGAA
GAGCCGGTGA AGGACGAACT GCATGTGACG GAGACCCGGG TGTTGTTGGT CAACACCGTT
CCGGTGCGGT CGCGGGGGCG GGCGATGGGC AATGTGGTGA CCCTGCGCGA TCACACCGAA
CTGCAGTCCT TGACGGGCGA GCTGGACACC GTACGTGCGT TCGCCGAGTC ACTACGAGCT
CAGGCGCACG AATCGGCCAA TCGTCTCCAC GCGGTGGTGT CGCTCGTCGA GCTCGGTCGC
ACCGAGCAGG CGGTGGCGTT GGCCACGGCG GAGCTGCGCA CGGCGCAGGA ACTCACCGAC
AGGGTGTTGG GTGCTGTCTC CGAACCCGTG CTGGCGGCTT TGCTGCTGGG GAAGTCGAGC
GAGGCGTCCG AACGTGGGGT CGAACTGGTG ATCACGGACG ACACCGTCCT CGACGACACG
AGTTCGACGA TCGACTCACG GGATCTCCTC ACCGTGCTCG GCAATCTCAT AGACAACGCG
GTGGACGCGG CGATCGAGAC AGCGGCCGAG CGCGCCCCGA CGGTACGGAT CACGGTGCGG
GTCGAGGAGG CGGTGCTCGT CATGCGGGTC GCCGACAGTG GGCCGGGAGT CGCTCCCGAG
GTCGGGGAGA GGATCTTCCG CCGCGGCTGG TCGACCAAGT CGGGTGGCGG GGAGGTCGGA
CGGGGGCTGG GGCTTGCGCT TGTGGGGCAG ACCGTGCGCC GACTCGGTGG CACGGTGACC
GTCACGGATT CGGATGACGG TGGTGCGGCG TTCACCGTCC GCATCCCTCT TCCCGCGGAG
TAG
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| Protein sequence | MLAMQLAVVT VLVLGGAILA YLDAAAGVER KAAEEAVAVA VTLADSADVR KAVQSPNPSS
RLQPFAERVR ADTGVGFITI MDRDRTRYTH PNPDRIGEPF IGNIEPALRG RTFTETYTGT
LGPSVRAVAP VMVDGEVVAL VAVGITLEAI STELAQRMPP VLGVAAGVLL VGVAGSVAVS
NRLRAQTRGV APDELSRMFD YYEAILHSVR EGLVLVDRDG RVGLYNDAAA ELLELPENAR
GAPVSELGLT DALSRTLLAE EPVKDELHVT ETRVLLVNTV PVRSRGRAMG NVVTLRDHTE
LQSLTGELDT VRAFAESLRA QAHESANRLH AVVSLVELGR TEQAVALATA ELRTAQELTD
RVLGAVSEPV LAALLLGKSS EASERGVELV ITDDTVLDDT SSTIDSRDLL TVLGNLIDNA
VDAAIETAAE RAPTVRITVR VEEAVLVMRV ADSGPGVAPE VGERIFRRGW STKSGGGEVG
RGLGLALVGQ TVRRLGGTVT VTDSDDGGAA FTVRIPLPAE
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