Gene Svir_25650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25650 
Symbol 
ID8387889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2763926 
End bp2764993 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content68% 
IMG OID644976605 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_003134383 
Protein GI257056551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG CCTTGGAAAA GCAGGAGCCC GAGCCGGCCG ACAGGGTCGC GCCCGAGACG 
TTGCGGGCAG CCGTCGACAC AGCCAAGAAG GAGTTCGCGG CCGCCGCGGA CCTGGACGCC
TTGGCCGCGG TGAAGCCGGC GCACTTCGGT GACCAGGCGC CGCTGTCGCT CGCCCGCCGG
GCGATCGGAG CGCTGCCCAA GGAACAGAAG GCGGACGCGG GTAAGCGGGT CAACGCGGCA
CGGCAGGAAG TGCAGGCGGC GTTCGAGGAA CGTCGAGCCG TGTTGCAGGC TGAGCGCGAC
GAGCGTGTGC TGCGCGAAGA AGCGGTCGAT GTGACTTTGC CGTGGGATCG CGTACCGCGA
GGAGCCCGGC ACCCCATCAG CGCCATCGCC GACCGGATCG CCGATGTGTT CGTGGGGATG
GGGTACGAGG TCGCCGAGGG GCCCGAGCTC GAGGCGGAGT GGTTCAACTT CGATGCGTTG
AACTTCGGCA AGGACCACCC GGCCCGGCAG ATGGCCGACA CCTTCTACGT GGCCCCTGAG
GGGTCGAACC TGGTGCTGCG CACCCACACG TCGCCCGTGC AAGCACGCGC CCTGCTGCAC
AGGGAGCTTC CGGTGTACAT CGTGTGTCCG GGTCGGACGT TCCGCGCCGA CGAACTGGAC
TCCACGCACA CTCCCGTGTT CCACCAGGTC GAGGGCCTGG CCGTGGACAA GGGACTCACG
ATGGCCCATC TGCGCGGCAC ATTGGACGCG TTCGCGAAGG CGATGTTCGG CGAGGAGTCC
GGTATACGCT TCCGCCCGCA CTTCTTCCCG TTCACCGAGC CGTCCGCCGA GGTGGACGTG
TGGTTCCCGG AGAAGAAGGG CGGCCCCGGT TGGGTCGAAT GGGGCGGTTG CGGCATGGTC
AACCCCAATG TGTTGCGGGC CTGCGGTGTG GACCCGGAGG TCTATTCCGG CTTCGCCTTC
GGCATGGGAT TGGAGCGGAC GCTCATGTTC CGCAACGGGA TCCCGGACAT GCGCGACATG
GTGGAAGGGG ACGTGCGGTT CACCCTTCCC TTCGGAACGG AGGCGTGA
 
Protein sequence
MSEALEKQEP EPADRVAPET LRAAVDTAKK EFAAAADLDA LAAVKPAHFG DQAPLSLARR 
AIGALPKEQK ADAGKRVNAA RQEVQAAFEE RRAVLQAERD ERVLREEAVD VTLPWDRVPR
GARHPISAIA DRIADVFVGM GYEVAEGPEL EAEWFNFDAL NFGKDHPARQ MADTFYVAPE
GSNLVLRTHT SPVQARALLH RELPVYIVCP GRTFRADELD STHTPVFHQV EGLAVDKGLT
MAHLRGTLDA FAKAMFGEES GIRFRPHFFP FTEPSAEVDV WFPEKKGGPG WVEWGGCGMV
NPNVLRACGV DPEVYSGFAF GMGLERTLMF RNGIPDMRDM VEGDVRFTLP FGTEA