| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25640 |
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| Symbol | |
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| ID | 8387888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 2761403 |
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| End bp | 2763919 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644976604 |
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| Product | phenylalanyl-tRNA synthetase beta subunit |
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| Protein accession | YP_003134382 |
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| Protein GI | 257056550 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.811582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTCC CCGTCAGCTG GCTGAGGGAA CACCTGGAAC TCAGCGAGGA CGTCACCACC
GACGACATCG TCGACGCCTT TGTACGCCTG GGCGTCGAGG TCGAGGGCGT CGAGCCGGTC
GGTCGGATCA CCGGTCCGCT CGTCATCGGC CGTGTGGTGG AGATCGAAGA GCTCACGCAG
TTCAAAAAGC CGATCCGCTA CTGCCGAGTC GACGTGGGTA CCCCCACCGA CCTCGACGGT
GGGGAGATCG ATCCCACGCG CCCGCCCACG AACGGCATCA TCTGCGGTGC TCAGAACTTC
AGGGAGGGCG ACCTGGTGGT CGTCGCGCTC CCCGGCGCCG TGTTGCCCGG TGATTTCGAG
ATCTCCGAGC GCAAGACCTA CGGCCACGTC AGTGAGGGCA TGATCTGTTC TGCCCGAGAG
CTGGGCATCG GGGAGGACCA CAGCGGAATC CTCGTGCTGC CGCCGGGGAC GGCCAGTCCC
GGCGACGACG CGCGTGAAGT CCTGGCTCTC GAGGACACGG TGTTGGAACT GGCTCCCACG
CCGGATCTCG GGCACGCGTT GTCGATCCGT GGGTTGGCCA GGGAACTGGC GTGCGCATTC
GACGCCCCCT ACGGCGATCC CGCCCACATC GACGTGCCGG AAGGCGAAGG TGACGCGTGG
CCGGTCACGA TCGAGGACCC GGTGGGCTGC CGACGGTTCG TGTTGCGCCG GGTCACCGGA
CTGGACGCGG GCGCTCCGAC GCCGTGGTGG ATCCAACGTC GGCTGTTGCT GGCGGGGATG
CGGCCGATCT CCTTGGCCGT GGACATCACC AACTACGTGA TGCTGGAGCT GGGACATCCC
CTGCACGCGT TCGACACGGG ATCCCTGCAG GGCGGTCTCG TGGTCCGCAG GGCGCAACCC
GGCGAGAAAC TGACCACATT GGACGATGTC GAGCGTACGC TCGACCCGGA CGACGTGGTG
ATCGCCGACG ACCGCGGTGT CATCTCGCTG GCGGGGGTCA TGGGAGGCGC CAGTACCGAG
ATCCGCGACG ACAGCACGGA CGTGTTGTTG GAGGCGGCGC ACTGGGACCC CGCGGCCATC
AGCAGGACCG CGCGCAGGCA CAACCTGTTC TCGGAGGCGG CGAAACGTTT CGAGCGGTTC
ACCGACCCGG CGTTGTGCGC GACCGCGGTC GAGGTCGCGG CGCGGTTGTT GCGGCAATAC
GGTGACGGCA GCATCCGGCC CGGTCGTACC GATGAGGGAC AGGTGGAGCC GGCTCAGTCG
ATCACCATGC CGATCAACCT GCCCGACCAG GTGGCGGGTG TGCGGTTCGA GCGGGGTGTC
ACCGTACGCA GGTTGACGCA GATCGGCTGC AAGGTGTCGG TGGGCACCGG CGATGACGGC
ACGGCGCTGG TCACCGCGGT GCCGCCGAGC TGGCGTGGGG ATCTCGAGCA GCCCGCGGAC
CTCGTGGAGG AGGTGCTGCG GCTGGAGGGG TACGACACGA TCCCGTCCGT GCTGCCCGCC
GCGCCGGCCG GCCGTGGTCT CACCGCCGCG CAGCGGCGCC GACGCGCGGT GTCGCGTGCG
CTCGCGGAGG CCGGTTACGT CGAGGTCATC CCGTTCCCGT TCGTCTCGGC GTCGGTGTGG
GACGACCTGG GGCTGGCCGA GGACGATCCA CGTCGGCGTA CGGTCTCGGT GTTGAACCCG
CTGGAGTCGG ACAAGGACCA GCTGACGACG TCGCTGCTGC CGGGTTTGCT CGAAACCCTG
CAGCGTAACG TCGCGCGGGG CTTCCGTGAC GTCGCGCTCT ACCACATCGG CCAGGTGGTG
TTGCCGGGGC CGGAGCAGTC CGTCGCTCCG GACCTTCGGG TGGATCAGCG GCCGGCCGAG
GAGGAACTCG CCGAGTTGGA ACGGTCGGTT CCGGACCAGC CGTTGCACGT CGCCGTGGTG
CTTGCCGGGG AGCGTTTCCG TTCCGGCTGG TGGGGCGAGG GGGAGAACGC GTCGTGGGCG
GACGCCGTGC AGGCAGCGCG CCTGGTGGGC GACGTCTCCG CCGTGGAGTT GGACATCGAG
GCGGACGCCG TGATGCCGTG GCATCCCGGC CGATGCGCCC GGTTGTCGAT CGATGGCCGG
ACGGTCGGAC ACGCCGGTGA GCTGCATCCC AAGGTGGTGG AGAAGCTCGG GCTGCCGAAG
CGGACTGCCG CGATGGAGCT GAACCTCGAC GCGATCCCGG TCGTGGAGCA CAGGCCTGCG
CCTTCGATCT CACCTTTCCC GCCGGTGTTG TTGGACGTGG CGCTGATCGT GGACGAGAAG
GTGCCGTCCG CGGCTCTTGC CGAGGCGTTG CGGGAAGCGG CCGGTGAGTT GGTGGAGGAC
GTGTCGCTGT TCGACGTGTA CTCCGGTGAA CAGGTCGGTG AGGGTAAGCG GTCGCTGGCG
TACAAGCTCC GGTTCCGTGC CCCTGACCGC ACACTCACCG TGGAGGAGGC GACCAAGGCG
CGGGATGCCG CCGTGGCCGC GGTCGGTGAG CGTTTCGGCG CGGTGCTGCG GGGCTGA
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| Protein sequence | MRVPVSWLRE HLELSEDVTT DDIVDAFVRL GVEVEGVEPV GRITGPLVIG RVVEIEELTQ
FKKPIRYCRV DVGTPTDLDG GEIDPTRPPT NGIICGAQNF REGDLVVVAL PGAVLPGDFE
ISERKTYGHV SEGMICSARE LGIGEDHSGI LVLPPGTASP GDDAREVLAL EDTVLELAPT
PDLGHALSIR GLARELACAF DAPYGDPAHI DVPEGEGDAW PVTIEDPVGC RRFVLRRVTG
LDAGAPTPWW IQRRLLLAGM RPISLAVDIT NYVMLELGHP LHAFDTGSLQ GGLVVRRAQP
GEKLTTLDDV ERTLDPDDVV IADDRGVISL AGVMGGASTE IRDDSTDVLL EAAHWDPAAI
SRTARRHNLF SEAAKRFERF TDPALCATAV EVAARLLRQY GDGSIRPGRT DEGQVEPAQS
ITMPINLPDQ VAGVRFERGV TVRRLTQIGC KVSVGTGDDG TALVTAVPPS WRGDLEQPAD
LVEEVLRLEG YDTIPSVLPA APAGRGLTAA QRRRRAVSRA LAEAGYVEVI PFPFVSASVW
DDLGLAEDDP RRRTVSVLNP LESDKDQLTT SLLPGLLETL QRNVARGFRD VALYHIGQVV
LPGPEQSVAP DLRVDQRPAE EELAELERSV PDQPLHVAVV LAGERFRSGW WGEGENASWA
DAVQAARLVG DVSAVELDIE ADAVMPWHPG RCARLSIDGR TVGHAGELHP KVVEKLGLPK
RTAAMELNLD AIPVVEHRPA PSISPFPPVL LDVALIVDEK VPSAALAEAL REAAGELVED
VSLFDVYSGE QVGEGKRSLA YKLRFRAPDR TLTVEEATKA RDAAVAAVGE RFGAVLRG
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