Gene Svir_25500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25500 
Symbol 
ID8387874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2743775 
End bp2744794 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content64% 
IMG OID644976590 
Producthypothetical protein 
Protein accessionYP_003134371 
Protein GI257056539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGAAG TCGATCGGCG CGGTTCGGGC GATAACGACG GATCGGCCTG GCAGAACCGT 
CGAAGTCAGA ATTCGGAAAA AAGAGATAAG AAATTCGACG AGCATCGGGA AACAATGGAC
GGGCGCGGCG ATAAACACCG GCATGGTGAA CGGACGCGTG ACGGTAAGCC CGGAAAAGGT
GATCGTGGTT TCCCCGAACG CCGAGCGGGA CGCCCCTACC GAAACAGGGA CGAACGTCGA
GGAAACGAAC GCCGCCGTGA CGACCGTGGT CGCAAACCCA TGCGGGCTCG GCCGGGACAT
GACAGTGGCG GACGTCCGGC CGGTCGGGGA AGAACCTCCC CGCAGCGCGA TCTTCCCATG
GAACCGGAAC TGCCCGAGTC CGTGGAGTTC ACCGACCTGG ATATCGAGGT GCGACGTGAA
CTACGGACCC TTCCGAAGAA CCTCGCCGAA CGTGTGGGTA GGCACCTCGT CGCCGCGGGC
ATGTTGATCG ACGATGACCC TGAGGCCGCC TTGGCCCATG CGCGATATGC GAAGTCGAAG
GCATCGCGCA TTCCGGTCGT TCGAGAAGCT CTCGGACTCA CCGCTTACCG CGCCGGGGAA
TGGGCCGAAG CCCTCTCGGA ACTGCGAGCG GTGCGCCGCA TGACTCGCAG TGACATGCAC
GTCGCTGTGA TCGCCGATGC CGAACGCGCC CTCGAACGCC CTGAGCGTGC CCTTGATCTG
GCCAAAGAAG TGGACACTTC CAAGCTGCCG AAGGACGTCC AGGTCGAGTT GAAGATCGTC
GTGGCGGGTG CCCGACGCGA TATGGGACAG CTCGACGCGG CAGTGGTGGA GTTGCAGGGC
CCCGACCTCG ATCCGAAGTT GCGCCGTCCG TGGAGTCACC GACTGTTCTA CGCGTACGCC
GACAACCTGG TCGCCGCGGG TCGCACCGAG GAGGCGGTCC AGTGGTTCCT CCACGCGGCC
GAAGCGGACG AGGAGGGAGA AACCGATGCT GCCGAACGCG CCGGGGAGTT GACAGGGTGA
 
Protein sequence
MSEVDRRGSG DNDGSAWQNR RSQNSEKRDK KFDEHRETMD GRGDKHRHGE RTRDGKPGKG 
DRGFPERRAG RPYRNRDERR GNERRRDDRG RKPMRARPGH DSGGRPAGRG RTSPQRDLPM
EPELPESVEF TDLDIEVRRE LRTLPKNLAE RVGRHLVAAG MLIDDDPEAA LAHARYAKSK
ASRIPVVREA LGLTAYRAGE WAEALSELRA VRRMTRSDMH VAVIADAERA LERPERALDL
AKEVDTSKLP KDVQVELKIV VAGARRDMGQ LDAAVVELQG PDLDPKLRRP WSHRLFYAYA
DNLVAAGRTE EAVQWFLHAA EADEEGETDA AERAGELTG