Gene Svir_25420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25420 
SymbolpyrG 
ID8387866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2734509 
End bp2736209 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content67% 
IMG OID644976582 
ProductCTP synthetase 
Protein accessionYP_003134363 
Protein GI257056531 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.199429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGACTTC AGCCGCGGAC TACCAAATAC GTCTTTGTCA CCGGAGGCGT CGCCTCCTCG 
CTGGGTAAAG GGCTCACCGC CTCCAGCCTC GGTCAACTCC TCACGGCCCG CGGGCTCCGG
GTCACGATGC AGAAGCTCGA CCCGTACCTC AACGTGGACC CCGGAACAAT GAACCCGTTC
CAGCACGGGG AGGTCTTCGT CACTGAGGAC GGGGCCGAAA CCGATCTCGA CATCGGTCAC
TACGAGCGGT TCCTCGACCG TAACCTGTCG GGTACCGCGA ACGTGACCAC CGGCCAGATC
TACTCCTCGG TCATCGCCAA GGAACGGCGC GGTGAATACC TCGGTGACAC CGTCCAGGTG
ATCCCGCACA TCACCGACGA GATCAAGTCG CGGATCATGG CGCTGGCCGC CGACGACGGC
AGTGGCACCA AGCCGGACGT CGTCATCACC GAGGTCGGCG GCACCGTGGG GGACATCGAA
TCGCTTCCGT TCCTGGAGGC GTGCCGGCAG GTCCGGCATG ATGTCGGCCG GGACAATTGC
TTCTTCCTGC ACGTGTCGCT GGTGCCGTAC CTGGCGCCGT CCGGTGAGTT GAAGACCAAG
CCCACGCAGC ATTCCGTGGC CGCGCTTCGC AACATCGGTA TCCAGCCGGA CGCGTTGGTG
TGCCGCGCGG ACCGGGAGCT GTCGGAGGAC GTCAAGCGCA AGATCGGCCT CATGTGCGAC
GTGGACACCG AGGCCGTGAT CGCCTGTCCG GACGCCCCGT CGATCTACGA CATCCCCAAG
GTGCTGCACC GGGAGGCCCT CGACGCCTAC GTGGTGCGCC GCCTCGGGCT GCCGTTCCGC
GATGTCGACT GGACGGTGTG GGGTGATCTG CTCGATCGGG TGCACAACCC CGCCGAAACC
GTGCGGATCG CGCTCGTGGG CAAGTACGTC GACCTCCCCG ACGCGTACCT GTCGGTCACC
GAGGCGTTGC GGGCGGGTGG GTTCTTCCAC CGTGCGAAGG TGGAGATCGT GTGGGTCGCG
GCCGACGAGG TCGCCACGCC TGCGGGAGCC GCCGCCGCCC TCTCCGATGT GGACGGCATC
CTGGTGCCGG GCGGTTTCGG TGTGCGCGGC ATCGAGGGCA AGATCGGAGC GATCAACTAC
GCACGGGTCC ACCAGATCCC GGTGTTGGGT CTGTGCCTGG GACTGCAGTG CATGGTGATC
GAGGTGGCGC GTAACCTCGC CGGCCTCCCC GACGCGAACT CGGTGGAGTT CGACGAGAAC
ACGCCCAACC CGGTGATCTC CACGATGGCC GACCAGAAGG ACGTCGTCGC CGGTGAACGC
GACATGGGCG GCACCATGCG ACTCGGTGCG TACCCGGCGC AGCTGGTCGA AGGCACCCAG
GTCGCCGAGG CGTACGGCGT GAAGGAGGTG TCCGAGCGGC ACCGGCACCG CTACGAGGTC
AACAACGCCT ACCGCAAGCA GCTCGCGGAC GCGGGCCTGG TGTTCTCCGG CCTGTCGCCC
GACGGTCGAC TCGTGGAGTT CGTGGAACTG CCGAAGGACG TGCACCCGTT CTTCGTGGGA
ACCCAGGCGC ATCCGGAGTT GAAGTCGCGT CCCACCCGGC CGCATCCGCT GTTCGTCTCG
TTCGTCCGCG CCGCGGTCGA CTACCACACG GCGGGACAGT TGCCGGTGAA GTTGCCAGAG
ACCACGGCGG CGGCCCGATG A
 
Protein sequence
MGLQPRTTKY VFVTGGVASS LGKGLTASSL GQLLTARGLR VTMQKLDPYL NVDPGTMNPF 
QHGEVFVTED GAETDLDIGH YERFLDRNLS GTANVTTGQI YSSVIAKERR GEYLGDTVQV
IPHITDEIKS RIMALAADDG SGTKPDVVIT EVGGTVGDIE SLPFLEACRQ VRHDVGRDNC
FFLHVSLVPY LAPSGELKTK PTQHSVAALR NIGIQPDALV CRADRELSED VKRKIGLMCD
VDTEAVIACP DAPSIYDIPK VLHREALDAY VVRRLGLPFR DVDWTVWGDL LDRVHNPAET
VRIALVGKYV DLPDAYLSVT EALRAGGFFH RAKVEIVWVA ADEVATPAGA AAALSDVDGI
LVPGGFGVRG IEGKIGAINY ARVHQIPVLG LCLGLQCMVI EVARNLAGLP DANSVEFDEN
TPNPVISTMA DQKDVVAGER DMGGTMRLGA YPAQLVEGTQ VAEAYGVKEV SERHRHRYEV
NNAYRKQLAD AGLVFSGLSP DGRLVEFVEL PKDVHPFFVG TQAHPELKSR PTRPHPLFVS
FVRAAVDYHT AGQLPVKLPE TTAAAR