Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_25250 |
Symbol | |
ID | 8387849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2719820 |
End bp | 2720845 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644976565 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_003134346 |
Protein GI | 257056514 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCG CACCGCCCAC CCCACCCACG GCCGCTCCGG GACGTCCCTT CGGCCGTGTG CTCACCGCCA TGGTCACGCC GTTCACCGCG GAGGGCGCGG TGGACCTGAA GCGGGCTCAG GAGCTCGCAA CACACCTGGT GGATCTGGGT AACGATGGTC TGGTCGTCAA TGGCACCACG GGTGAAAGCC CCACGACGAG CGACGCGGAG AAAACCGACA TGGTCCGGGC CGTCGTGGAG GCCGTCGGTG ACCGTGCCAC CGTCGTGGCG GGCGCGGGCA CGTACGACAC CGCGCACAGC GTGGAGCTCG CTCGCCGGGC GGAGCAGGCC GGTGCCCACG GTCTGCTCGT CGTGACGCCG TACTACTCGC GCCCCACCCA GGCCGGTCTG TTCGCTCACT TCACCACGGT CGCGGACGCC ACCGAGCTGC CGGTGATGCT GTACGACATC CCGCCCCGCT CGATCGTGCC CATCGAGGTG GATACCCTGC GCAGGCTCGC CGAACATCCG CGTATCCTCG CCGTCAAGGA CGCCAAGGGC GACCTGTTGG CGGGGAGCGA GGTCATCGCC AACACCCACC TCGCGTACTA CTCCGGCGAC GACGGGCTCA ACCTCCCGTG GTTGTCGGTC GGCGCGACCG GCGTGGTCAG CGTCATCGGC CACGTCGTGG CCGGGCGGAT CCGCGCGATG ATCGATGCCT ACGAAAGCGG CGACACCTCC ACCGCCCGGA CCAATCACCG TGGCATGATC CCGGTGTACC GCGCGTTCTC GCGCGTCGGT GGCGTGGTGT TTGCTAAAAC GGCGTTGCGG CTGCGCGGTA TCGACGCGGG GGACCCGCGG CTACCGATCG TGCCCGCCAC CGAGGACCAG GTCCGGGCCA TCGCGGACGA CCTCACGCAG GCGGGGGTGC CGCTGGAGAG TTCCTCCGCG GACGACTGGG CGGGTCCACG TGTGGCCCAG GCCGATTCGG CGGCCGCCTA CGTCGCACCT ACCACTCACA CGAGCGTTGG GACGATTCAT CGGTGA
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Protein sequence | MSIAPPTPPT AAPGRPFGRV LTAMVTPFTA EGAVDLKRAQ ELATHLVDLG NDGLVVNGTT GESPTTSDAE KTDMVRAVVE AVGDRATVVA GAGTYDTAHS VELARRAEQA GAHGLLVVTP YYSRPTQAGL FAHFTTVADA TELPVMLYDI PPRSIVPIEV DTLRRLAEHP RILAVKDAKG DLLAGSEVIA NTHLAYYSGD DGLNLPWLSV GATGVVSVIG HVVAGRIRAM IDAYESGDTS TARTNHRGMI PVYRAFSRVG GVVFAKTALR LRGIDAGDPR LPIVPATEDQ VRAIADDLTQ AGVPLESSSA DDWAGPRVAQ ADSAAAYVAP TTHTSVGTIH R
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