| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_25220 |
|---|
| Symbol | |
|---|
| ID | 8387846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2716039 |
|---|
| End bp | 2716926 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644976562 |
|---|
| Product | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| Protein accession | YP_003134343 |
|---|
| Protein GI | 257056511 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
|---|
| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.686471 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTTTGA TCGGCAAACT CCCTCCCCGT GCCGAGAACA CCTGCACGCA TGACATGCTT
CGCCCCATGG TGGCGCTTCG ACACGACCGC AAGTCCGCCA AACGGCGGAC AGAACGTGTC
CCGTTGATCT GGCGGACGAT CCTCGCTCTC GATCATGGAC TGGTGAACGT GGCCGGGCGG
CTACGCGTCA GCGGGAACGT TCCGTACAAG TTACGGGGGA AACCGCTCCT CATGGCCGCG
AACCACATCG GGGTGTTCGA CGCGTTCGTG CTGATGGCCG CGTGCCGACG CATCGGTCTT
GCGCCACGGT TCATGCTCGC GGGCGGCTTG TTGGACGCGC CGATAGTGGG CCCCGCGCTG
CGGGCCAGCG GTCATCTGCG GGTCGACCGA GGCTCGGCCT CGGCCGTAAC CCAATTCGCG
CAGGCCGCCG AAGCCCTGCG GACGAGTACG TCCCCGATCA TCGTCTATCC GGAGGGGCGG
ATCAGCCACG ATCCGGGGCT GTGGCCGGAA CGCGGCAAGA CCGGTGCCGC ACGCCTCGCC
CTGTCGGCGA ACGTCCCCGT CATCCCCATC AGTCAATGGG GCGCGCACGA AGCCGTGTAC
TGGGGCACCG AGACGGTCAC CGGCCTGGCC GACATCGTGC CGTTGGCACG GTCGGGACTC
ACCTCCCCGC TGCGTCGTCC CACCTTCCGG GTGCATTTCG GGGAACCGGT CGATTTGTCG
GAGTTCAAAG CCGGCAGGCC CGGTGACGCC GTGAAAGCCC ACGCGGCGAT CATGCGGGCG
ATCACCGAGG GGCTCGTGCC GCTGCGGGCC GACGAACCGG ACCTACCGCG ATTCCACGAC
CCGACCCGGC CCACCGACGG ACACAGTCCC TGGCGACCGG GAACGTGA
|
|---|
| Protein sequence | MTLIGKLPPR AENTCTHDML RPMVALRHDR KSAKRRTERV PLIWRTILAL DHGLVNVAGR
LRVSGNVPYK LRGKPLLMAA NHIGVFDAFV LMAACRRIGL APRFMLAGGL LDAPIVGPAL
RASGHLRVDR GSASAVTQFA QAAEALRTST SPIIVYPEGR ISHDPGLWPE RGKTGAARLA
LSANVPVIPI SQWGAHEAVY WGTETVTGLA DIVPLARSGL TSPLRRPTFR VHFGEPVDLS
EFKAGRPGDA VKAHAAIMRA ITEGLVPLRA DEPDLPRFHD PTRPTDGHSP WRPGT
|
|---|
| |