Gene Svir_25060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25060 
Symbol 
ID8387830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2699784 
End bp2700200 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content67% 
IMG OID644976546 
Producthypothetical protein 
Protein accessionYP_003134327 
Protein GI257056495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCT CCGAGCATGA GCAGCGGCTG CTCGACCAGA TCGAGCGCGA GCTCTATGCC 
GAGGACCCCA AGTTCGCATC CGCTGTGCGC GGTACCAGTA TGCGCCGCCC CACGCGCCGT
CGACGTGTGC AGGGCATTGC CCTCTTCGTC GTGGGCGTCG CCATGCTCGT GCTCGGTGTC
GCGGGCCAGG CGCCATTCCT GCGCATCGCC GAGATCCCGT GGCTCAGTGT GCTCGGGTTC
CTGGTGATGT TCGGTGGCGT GCTACTGGCT GTGACAGCAC TGGGAGCATC TGGGGAGGTC
GTTGATCCCG CGCCCCAAGG CCGCGGCGGC CATGGTGGCC GCGGTGGTGC TCCCGCCAAG
AGTTCTTTCA CCGAGCGCAT GGAGGAGCGT TTCCGCCGGC GCTTCGAGGA CCGCTAG
 
Protein sequence
MPLSEHEQRL LDQIERELYA EDPKFASAVR GTSMRRPTRR RRVQGIALFV VGVAMLVLGV 
AGQAPFLRIA EIPWLSVLGF LVMFGGVLLA VTALGASGEV VDPAPQGRGG HGGRGGAPAK
SSFTERMEER FRRRFEDR