Gene Svir_25000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_25000 
Symbol 
ID8387824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2692923 
End bp2693495 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content71% 
IMG OID644976540 
Producthypothetical protein 
Protein accessionYP_003134321 
Protein GI257056489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCGG AGGTCGGGAC CGACAACGAT CCGGCCGTGG CGGGTGAGAT CGGTCGTGAA 
TGGACCAAGC TCGCGCGTGA GCTGCGCGAG GTGGGGGATA CGTTGGCGGC GTTGTCCGAG
GCCAGTGAGA GGGCATGGCA GGGCGGTGCC GCCGAGTCGA TGCGATCGGT GCTACGCGAT
GCCGTGGCTT GGACGGAACA GGCCGCCGAC GTGTCGGACA CCGTGGGTCA GGCGGTGGTG
GGACAGGCCG AAGTCGCCGC GCGAGCCAAG GCGGAGATGC CGGAACCCGT GTCCTACGAC
CCGGCGGCGA TGATCCGGGA AGCGGCGTCC GCCGGGGACG TGTGGCGGCT CGTGGGGCTG
TCCGATGCCA TGGCGGCCCG CAGGGACGAG GCCGAGCATG CCCGCCAGCA GGCCGTCGAC
GTGATGTACG CCCGGTCCGC GGCACTCGGT TCCGCCGTGC CGGACGGGGA GTTTCCGACG
CCGCCGAGGT TGACGAGCAC CGGGGAGTCG GACGCCGACG GTGGCACGGG CCGTGGTACC
GGCTCGACGG TCGGAAGGTC GGTCCCGGTG TGA
 
Protein sequence
MYAEVGTDND PAVAGEIGRE WTKLARELRE VGDTLAALSE ASERAWQGGA AESMRSVLRD 
AVAWTEQAAD VSDTVGQAVV GQAEVAARAK AEMPEPVSYD PAAMIREAAS AGDVWRLVGL
SDAMAARRDE AEHARQQAVD VMYARSAALG SAVPDGEFPT PPRLTSTGES DADGGTGRGT
GSTVGRSVPV