Gene Svir_24950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24950 
Symbol 
ID8387819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2687535 
End bp2689448 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content65% 
IMG OID644976535 
Productcell division protein FtsI/penicillin-binding protein 2 
Protein accessionYP_003134316 
Protein GI257056484 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.439069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.626592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGC AACGCGGTGT GCCGAGAGCC AGAGCCGGTA ACGTGCCGCA TCGCACGTAT 
TCGGTCAGGG CTCGTCGGAA GCGTTCGGCC ACCACGGTAC GCAACAATCG CAACCGATTC
GTCGTAGGGC GCATCGTATT GACACTCGTG CTGGTGGCCG CGGGGCTGAA ACTCGTGCAC
ATCCAGGCCT TCGAGGCCTC CGCGCTGTCC GAACGGGCCG AACGGCAGCG TACGACCATC
ATCGACATCC CCGCTGAACG AGGGTCCATT GTGGATCGAA ACGGGGCTGA ACTCGCGTTC
AGCGTCGAGA CCCGAAAACT GTGGGTCAAC CTGCGGCAGA TGCGGCAGGC GTGGGACGAA
TACGCGCGTG AGCACCCGGA ATCGGGTGAG AACTTCGACA CCCGTGCGGA CGAGATAGCC
GGGTACATCG CCAGCCGGGT GCCCGACCTG GTCACCAAGA AGGAGTTGCT CGACGCCTTT
CACAAGGACG CCTCCTTCAC CTATCTCATC GAAGTCGAAC CATCGGTGGC CGAGGAGATC
AGCAAGCGGT ACCACGAGAT CGGGTACGAG AAGCGCGCCA AGCGCGTGTA CCCGGGTGGT
GAGCTCGCCG CGAACGTGGT CGGCTACGCG AATTGGCGCA CCGAGAGCGA GGACGTGTCC
GAGCACAACC TGCACGGACT GTCCGGTTTG GAGTACTACC GAGACGAGGA CCTGGTCGGC
ACCCCGGGGC GGCAGATCGT CGACACGGAA CAGGGCACCG ATGTCGTGAT CCCCGGCACG
GAACGGGACA TGCGGCCGGC TGCACCCGGC TCCGACCTGG AGCTGACGAT CGACTCCGAC
GTGCAGTACG AGTTGGAGCG CAGCCTCGCC GATTACGTCG ACAAGGTGGA CGCCAAGGGG
GGCAGTGCGG TCATCCTCGA CGCGAAGACC GGCGAGGTGT ACGCGCTGGC GAACAACAAG
ACGTTCGATC CGAACGATCC GGCGGCGTTG TCGACCGAGG CGATGGGCAA TCCAGCGGTG
TCGACACCGT TCGAACCGGG ATCGGTCGCC AAGGTGATCA CCGCGACCGC CGCGATCGAG
TCCGGCATCG TCACACCGGA GACCAAGCTG GCGGTACCGG GGGCGATGAA GGTGGCCGAC
CATACCGTGC ACGACGCGTG GTCGCACGGC ACGCAGGACT TCACGGTGAC CGGCATCTTC
GCGAAATCGT CCAACGTCGG CACGTTGTTG TTGGCCGAGA AGATCGGTCC TGACCGGTTC
ATGGACGTTG TGGACCGGTT CGGCATCGGT CACCGCACGA ACATCGGGCT GCCCGGGGAA
AGCGCGGGTT ACGTTCCGCC GCGTGAACAG TGGTCGGGTA CCACCTTCGG CAACTTGCCG
ATCGGGCAGG GACTGTCGAT GACGGTGGTG CAGATGGCGA GCATGTACCA GGCGATCGCC
AACGGCGGGG TGCGGGTGGA GCCGCGCATC GTCAAGGCGA AGATCGCACC GAACGGCCGT
CGGATTCCCG AGCCGGCGCC GGCGGCCACG CGGGTGACGG ACGCGAAGAC GGCTGACACG
GTGAAGGAGA TGTTGTGCGC GACGACACAG GACGGTGACT ACTACTACAA CGGCACGGCT
CCTGACGCGG CGCTCGAGGG ATACCGGATC GCCGGCAAGA CCGGAACCGG GCAACAGGTG
AACCCCAAGA CCGGCGCCTA CAGCAACAGG CTGCACAACA TCACGTTCGC GGGAATCCTG
CCCGCCGATG AGCCGCGGTT CGTGGTGGGC ATCTGGTTGG ACGCGCCCGA CACCACCATC
CCGGGCGGCG GTTCGGCTGC GTCACTGTTC CACGAGATCG CGTCCTACCT GGCCCAGCGG
TACAACATCC CGGTCTCCGA TCAATCTGCG CCGAGGGTGA GATTGGTGTA CTGA
 
Protein sequence
MPGQRGVPRA RAGNVPHRTY SVRARRKRSA TTVRNNRNRF VVGRIVLTLV LVAAGLKLVH 
IQAFEASALS ERAERQRTTI IDIPAERGSI VDRNGAELAF SVETRKLWVN LRQMRQAWDE
YAREHPESGE NFDTRADEIA GYIASRVPDL VTKKELLDAF HKDASFTYLI EVEPSVAEEI
SKRYHEIGYE KRAKRVYPGG ELAANVVGYA NWRTESEDVS EHNLHGLSGL EYYRDEDLVG
TPGRQIVDTE QGTDVVIPGT ERDMRPAAPG SDLELTIDSD VQYELERSLA DYVDKVDAKG
GSAVILDAKT GEVYALANNK TFDPNDPAAL STEAMGNPAV STPFEPGSVA KVITATAAIE
SGIVTPETKL AVPGAMKVAD HTVHDAWSHG TQDFTVTGIF AKSSNVGTLL LAEKIGPDRF
MDVVDRFGIG HRTNIGLPGE SAGYVPPREQ WSGTTFGNLP IGQGLSMTVV QMASMYQAIA
NGGVRVEPRI VKAKIAPNGR RIPEPAPAAT RVTDAKTADT VKEMLCATTQ DGDYYYNGTA
PDAALEGYRI AGKTGTGQQV NPKTGAYSNR LHNITFAGIL PADEPRFVVG IWLDAPDTTI
PGGGSAASLF HEIASYLAQR YNIPVSDQSA PRVRLVY