Gene Svir_24900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24900 
Symbol 
ID8387814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2681979 
End bp2682776 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID644976530 
Productpredicted phosphoesterase, ICC 
Protein accessionYP_003134311 
Protein GI257056479 
COG category[R] General function prediction only 
COG ID[COG2129] Predicted phosphoesterases, related to the Icc protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.45457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.373005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTAC ATGTCGTCTC CGACGTGCAC GGCAATGCCG AGGCGTTGTC TCGCGCGAGC 
GAAGGAGCGG ACGCGCTGAT CGTGCTCGGA GATCTGCTCG ACTTCATCGA CTACCACGAT
CACCGCGGCG GCATCTTCGG CCGACTCTTC GGAGAGGACA ACGTCAGCGC CTACGCGACC
CTGCGGAGGA CGGGCACGCG CGCCGAGATG AGGGCCTTCG TCCAGTCGCT GTGGGACAGC
CTCGACGACC CGGCAGCCGC CGTCGACGAG GCCATGCGCG AGCAGTACGC GCGCCTGTTC
TCGACGATGG CCGCGTTGGA CGTCCCGGTC TACGCCATCC CGGGCAACGT CGACGCGCCC
GCGCTGTGGC CCGAGTTCGC GTCGGACGGT GTTCGACTGG TGGACGGCGA CGTGGTCGAG
ATCGGCGGAC TGCGGTTCGG GTTCGTCGGG GGAGCGGTTC TCCCCGAGGG CGCCACGCCG
CGAGCCAACG CGGTATGGCG ACCCCACCTG TTGACCCGCG AGGAGTTCGA CGAGCGCGTG
GCCGGGCTGT CCGATATCGA CGTGTTGTGC AGCCACATCC CGCCCGCGAT CCCCGAACTC
ACCTACGACG TGGTCTCCCG CACAGTGGAG ATAGGGGCAC GATCGCTGCT CGAACGGATC
CGAGCCGAAC GACCGCGGTG GTCTCTGTTC GGGCACGTCC ACCAACCACT GACGGCGCGA
TTCCGGGTGG AGTACACCGA GTGCCGCAAT GTGGGGCACT TCCAACGGAC GGCTGTCCCC
TACGTGTTGC GCTGGTGA
 
Protein sequence
MRVHVVSDVH GNAEALSRAS EGADALIVLG DLLDFIDYHD HRGGIFGRLF GEDNVSAYAT 
LRRTGTRAEM RAFVQSLWDS LDDPAAAVDE AMREQYARLF STMAALDVPV YAIPGNVDAP
ALWPEFASDG VRLVDGDVVE IGGLRFGFVG GAVLPEGATP RANAVWRPHL LTREEFDERV
AGLSDIDVLC SHIPPAIPEL TYDVVSRTVE IGARSLLERI RAERPRWSLF GHVHQPLTAR
FRVEYTECRN VGHFQRTAVP YVLRW