Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_24900 |
Symbol | |
ID | 8387814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | - |
Start bp | 2681979 |
End bp | 2682776 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644976530 |
Product | predicted phosphoesterase, ICC |
Protein accession | YP_003134311 |
Protein GI | 257056479 |
COG category | [R] General function prediction only |
COG ID | [COG2129] Predicted phosphoesterases, related to the Icc protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.45457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.373005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGGTAC ATGTCGTCTC CGACGTGCAC GGCAATGCCG AGGCGTTGTC TCGCGCGAGC GAAGGAGCGG ACGCGCTGAT CGTGCTCGGA GATCTGCTCG ACTTCATCGA CTACCACGAT CACCGCGGCG GCATCTTCGG CCGACTCTTC GGAGAGGACA ACGTCAGCGC CTACGCGACC CTGCGGAGGA CGGGCACGCG CGCCGAGATG AGGGCCTTCG TCCAGTCGCT GTGGGACAGC CTCGACGACC CGGCAGCCGC CGTCGACGAG GCCATGCGCG AGCAGTACGC GCGCCTGTTC TCGACGATGG CCGCGTTGGA CGTCCCGGTC TACGCCATCC CGGGCAACGT CGACGCGCCC GCGCTGTGGC CCGAGTTCGC GTCGGACGGT GTTCGACTGG TGGACGGCGA CGTGGTCGAG ATCGGCGGAC TGCGGTTCGG GTTCGTCGGG GGAGCGGTTC TCCCCGAGGG CGCCACGCCG CGAGCCAACG CGGTATGGCG ACCCCACCTG TTGACCCGCG AGGAGTTCGA CGAGCGCGTG GCCGGGCTGT CCGATATCGA CGTGTTGTGC AGCCACATCC CGCCCGCGAT CCCCGAACTC ACCTACGACG TGGTCTCCCG CACAGTGGAG ATAGGGGCAC GATCGCTGCT CGAACGGATC CGAGCCGAAC GACCGCGGTG GTCTCTGTTC GGGCACGTCC ACCAACCACT GACGGCGCGA TTCCGGGTGG AGTACACCGA GTGCCGCAAT GTGGGGCACT TCCAACGGAC GGCTGTCCCC TACGTGTTGC GCTGGTGA
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Protein sequence | MRVHVVSDVH GNAEALSRAS EGADALIVLG DLLDFIDYHD HRGGIFGRLF GEDNVSAYAT LRRTGTRAEM RAFVQSLWDS LDDPAAAVDE AMREQYARLF STMAALDVPV YAIPGNVDAP ALWPEFASDG VRLVDGDVVE IGGLRFGFVG GAVLPEGATP RANAVWRPHL LTREEFDERV AGLSDIDVLC SHIPPAIPEL TYDVVSRTVE IGARSLLERI RAERPRWSLF GHVHQPLTAR FRVEYTECRN VGHFQRTAVP YVLRW
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