Gene Svir_24760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_24760 
Symbol 
ID8387800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2668544 
End bp2669449 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID644976516 
Productacyl-CoA thioesterase II 
Protein accessionYP_003134297 
Protein GI257056465 
COG category[I] Lipid transport and metabolism 
COG ID[COG1946] Acyl-CoA thioesterase 
TIGRFAM ID[TIGR00189] acyl-CoA thioesterase II 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT CGGCAAAACA GGCTGCGTCC GCACTCGATA CCGAGGGTGG TGTCGGGGGA 
CAGCCCGTGC TCGACAAGCT GATCGGCTTG TTGGATCTCG AAAAGATCGA GGAGAACATC
TACCGGGGCG TCAGCCCGCC GCATTCGTCG ACCCGCGTGT TCGGTGGTCA GGTCGCAGGT
CAGGCCTTGG TGGCCGCGGG GCGCACGGTG CCGAGCGAGC GTGGTGTGCA CTCGCTGCAC
GCCTACTTCA TTCGACCCGG CGACCCGAAG GTGCCGATCA TCTACGAGGT GGACCGCATT
CGAGACGGTC GGTCGTTCAC CACGCGGCGA GTGGTGGCGA TCCAACACGG CCAGGCGATC
TTCTCGTTGT CCGCCTCGTT CCAGGTGACC GAAGTCGGTG TCGAGCACAC CGAGCCGATG
CCCGACGTAC CCGACCCTGA GTCGCTCCCC ACGCTGGCCG AGCGAGTGGT GGGCTACGAG
GACAAGCTCA ACCTGCGAGC GCAGCCGCGT CCGCTGGATG TCCGCTATGT CAACGATCCG
CCGTGGGTGA CCAGGGGGAC GGGTTCCCCC CCTGCGCGCA ACCAGGTGTG GATGCGCGCT
GACGGGACTC TTCCCGACGA CCCTCTGCTG CATGTGTGCG TGCTGACGTA TGCGTCCGAC
ATGACGTTGT TGGATTCCAC ATTGGCGCGC CATGGGGTGT ACTGGGGTTT CGATCGGGTG
CTCGGCGCGA GTCTGGACCA CGCGTTGTGG TTTCACCGAC CGTTTCGCGC TGACGAGTGG
TTCCTGTACG ACAGTGCCTC GCCCACGGCG TCGAATGCGC GTGCCTTGGC GACAGGTCGA
CTGTTCTCCC GGGATGGAAC GTATATCGCC ACCGTGGTGC AGGAAGGGCT GATTCGGCTG
TTGTGA
 
Protein sequence
MTESAKQAAS ALDTEGGVGG QPVLDKLIGL LDLEKIEENI YRGVSPPHSS TRVFGGQVAG 
QALVAAGRTV PSERGVHSLH AYFIRPGDPK VPIIYEVDRI RDGRSFTTRR VVAIQHGQAI
FSLSASFQVT EVGVEHTEPM PDVPDPESLP TLAERVVGYE DKLNLRAQPR PLDVRYVNDP
PWVTRGTGSP PARNQVWMRA DGTLPDDPLL HVCVLTYASD MTLLDSTLAR HGVYWGFDRV
LGASLDHALW FHRPFRADEW FLYDSASPTA SNARALATGR LFSRDGTYIA TVVQEGLIRL
L