| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24640 |
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| Symbol | |
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| ID | 8387788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2659020 |
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| End bp | 2659871 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976504 |
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| Product | spermidine synthase |
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| Protein accession | YP_003134285 |
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| Protein GI | 257056453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.845245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGAGG GGCTCACTCG GGTCTGGGAC GTTTCCGAAG TGGTCCTCGA TATGCGCACC
GACTACCAGC ACGTGGTGAT CGGTCGCACG AGCCAGGGCT TGTCGCTGTT CTGTGACAGC
GAACGGCAGA GCACCGAGGC CAGTCAGCTC GTCTACCACG AGGCCCTGAT GGTGCCGCCG
ATGCTGCTCG CCGACACGGT GGAACGTGTC CTGATCATCG GCTCCAGCGA GGGGGTGGCT
AGCCAGCTCG CCATCGCCTA CGGCGCCGAG CTGGTGGACC ACGTCGACAT CGACGCCGAG
ACGGTGCGGG CATGTGCCCA ACACCTGCCG TACGGCTACA CCCCCGAGGA GCTGACCGAG
GCCGAACGTG GCACCGGACG TGTCCGGGTC CATTACCGCG ACGGGTGGGA GTTCCTGACG
ACGACCACCA CCCGCTACGA CGTCGTGGTG ATCGACCTGC CCGATGAGAA CGCCGATCCG
GAAGCGCAGC ACAACCGGCT CTACAGCAAG GAGTTCCTGC GCCGCTGTTC GGACGTGCTG
GCCCCCGGCG GTGTCGTGTG CTGCCAGGCG GGTTGCCCCA CGTTGTGGCG TAACGACACC
TTGCTCGCCG CGTGGCAGCG TTTCACCGAG TCGTTCGGCA CCGTCGTCTA CTTCGGCTCC
GACGAGCACG AATGGGCCTT CTTGTCGGGC CGCCCGGACG AACACCCGAA CGCCGTCGAA
TCGATGATCG ACAAGTTGCC GAAGTCGGAG TACCAGCCTG AGTCCATCGA CAGCGAGACG
CTGCGGGGAT GTACCGTGCC GCCGCGTTCG GTACGGCTCA GAGCTTCCGA CCTTCGGCAA
CCCGCCGAGT GA
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| Protein sequence | MGEGLTRVWD VSEVVLDMRT DYQHVVIGRT SQGLSLFCDS ERQSTEASQL VYHEALMVPP
MLLADTVERV LIIGSSEGVA SQLAIAYGAE LVDHVDIDAE TVRACAQHLP YGYTPEELTE
AERGTGRVRV HYRDGWEFLT TTTTRYDVVV IDLPDENADP EAQHNRLYSK EFLRRCSDVL
APGGVVCCQA GCPTLWRNDT LLAAWQRFTE SFGTVVYFGS DEHEWAFLSG RPDEHPNAVE
SMIDKLPKSE YQPESIDSET LRGCTVPPRS VRLRASDLRQ PAE
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