| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24620 |
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| Symbol | |
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| ID | 8387786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2657447 |
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| End bp | 2658616 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644976502 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_003134283 |
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| Protein GI | 257056451 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACAA CGGTTGACCG GATCCGTGCC TTTTTGGACC ACCATCGACC CCCGACACCA
TGTCTGGTGG TGGATATCGA CACCGTGATC GACCGGTACT CGAGATTCAC GGAAGCCTTC
CCGGACGCGC ACGTGCAATA CGCGGTGAAA GCGAATCCCC ATCCCGCCGT GGTGCGTGCG
CTGGTGGACG CCGGTGCGGC CTTCGACGTG GCAAGCCCCG GCGAGATCGA TCTCTGTGTG
GAAGCCGGGG CACGACCGGA CACCCTGTCG TACGGCAACA CCATCAAAAA GCCGTCCGAC
ATCGCGCACG CCCACGCCGC CGGCGTCCGG GAGTACACAT TCGACGCCCG CAGCGATCTG
GACAACATCG CCCGACACGC CCCGGGCGCA CAGGTGTCGG TGCGTCTCCT GGTGGAAGGC
GGCCCCGACT CCGTCACCCC GTTCGGGAAC AAATTCGGCT GCAACACCGA CGACGCCGTC
CGCATGCTGC TGCGAGCGGC GGAATCCGGA CTCGAACCGG TGGGTGTCAG TTTCCACGTC
GGCTCACAGC AACTGGAGCC CGCCGCCTGG GACCTCGCCG TGGCCTCGGC CGCGAAGGTG
TTCGCCGGTG TCGCCGAGCA CGGCGTGACA CTACGGCGAC TCAACGTCGG GGGCGGATTC
GGCGTCGACT ACATCGACAC CGCGCCCCCC ATGTCGGCGT ACGCCGACAC CATCCTCTCC
GCGGTACGCT CCCATTTCCC CGAACCGCCG GAACTCGTCT GCGAGCCGGG ACGCGCGCTC
GTCGCCGAAG CGGGAATGAT CCGCAGCGAG GTCGTCGTCG TGGCCCGGAA ACACCCCACC
GACGAACACC GGTGGGTGTA CCTGGACATT GGCCGATACA ACGGTTTGGC GGAAACTGAG
AACGAGGCGA TCGCCTACCG GCTCGTACCT GTGGGCACGC ACTCGCAGGA AGACGGCCCT
GTGATCATCG CCGGGCCGAC ATGCGATGGT GATGACGTGC TCTATCAGAG GACGCCGTAC
CGGCTGCCCT TGTCCTTGGA GCCCGGCGAC CGGATCGACA TTCTCGCGTC CGGCGCGTAC
ACGGCGAGTT ACTCGTCGGT CGCGTTCAAC GGAATAGAAC CCCTACGTAC GTACTGCATT
TCCGAAGGGA GGCTGATCAG TGCCGAGTGA
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| Protein sequence | MSTTVDRIRA FLDHHRPPTP CLVVDIDTVI DRYSRFTEAF PDAHVQYAVK ANPHPAVVRA
LVDAGAAFDV ASPGEIDLCV EAGARPDTLS YGNTIKKPSD IAHAHAAGVR EYTFDARSDL
DNIARHAPGA QVSVRLLVEG GPDSVTPFGN KFGCNTDDAV RMLLRAAESG LEPVGVSFHV
GSQQLEPAAW DLAVASAAKV FAGVAEHGVT LRRLNVGGGF GVDYIDTAPP MSAYADTILS
AVRSHFPEPP ELVCEPGRAL VAEAGMIRSE VVVVARKHPT DEHRWVYLDI GRYNGLAETE
NEAIAYRLVP VGTHSQEDGP VIIAGPTCDG DDVLYQRTPY RLPLSLEPGD RIDILASGAY
TASYSSVAFN GIEPLRTYCI SEGRLISAE
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