Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Svir_24530 |
Symbol | |
ID | 8387777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharomonospora viridis DSM 43017 |
Kingdom | Bacteria |
Replicon accession | NC_013159 |
Strand | + |
Start bp | 2643781 |
End bp | 2645295 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644976493 |
Product | hypothetical protein |
Protein accession | YP_003134274 |
Protein GI | 257056442 |
COG category | [S] Function unknown |
COG ID | [COG1306] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.49378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGGTGA CGGCGGTGTC AGCGGCCGTG GCGATTCCGT TGAGCATCGG CGATCGACCC GACGCCACGA TCCTGGGCTT GCCCGGTGAG ACGATCGGCC CCACCGGCAT ACGCGATGTC GTCATCAGCT CCCAGCACGG CCTCGAAGGA TTACATGCCA CATTGGACGA ACAGCCGTTG CCGTTGCGTC GGGACGGGAA CTGGCTGCGA CCCGACATCG GTGAACTGCC CGAGGGCTGG CACACGCTCG TGGTCACGCC ACCACCGGAC TTGTTCGGAA ACGCCACGCC AGCCCAAGTC ACCTTCAAAG TCGACGCCAC TCCCCCCGAG CTGACGGTAC AGCCGCCCGA ACCCGTCAAG CCCGGCACGA TCGGCGAGAT CCGTGGTATC GCACGGGATG CCGTCATCGT CTCGATGGGC GACGAGGAAG TGCAGCCGGC CGAGGACGGT TCGTTCGTCC TTCCCGTGCG GGCCGATGCG GGCACCGTCA CCATCACCGC CCGTGATGCG GCGGGCAACA CGGCTGTCGA AGAGGTCCCG GTGCCGCTGC GGCATCCCGG CATGAAAGCC GTACACCTGA CGGCGAGCGC CTGGGCGAGC CCCGAGCTGC GGGAGCCCGT GCTGGACATG GTCCGGGAAG GCCGGATCGA CACCGTACAA CTCGACATCA AGGACGAAAG CGGCCAGATC GGATACGCCT CACAGGTTCC GCTGGCTCAG CGGATCGGCG CCAACACCCG GCTCTACGAC GCTCGAGAGG CCTTGGACGT ACTGCACTCG GAAGGGGTGC ACGTAGTGGG CAGACTCGTC GCCTTCCGCG ATCCCATCCT CGGCAGAGCG TCCTGGGAGG AGGGCGAATA CGACCGGGTC ATCCAGAACA CCGAAGGAAA CGCCTGGTCG GGATACGGCG AATACTCCTT CACCAACTTC GCCGACCCCG TGGTACGGGC CTACAACATC GCACTGGCCG AGGAAGCCGC CGAACTCGGT TTCGACGACA TCCTCTACGA CTACATCCGT CGACCCGACG GCGACGTCTC ACAGATGGTG TTTCCCGGTC TGACGACGAC CCCGGAGGAG TCGATCGCGA GTTTCCTCGC CGAATCGCGT GTGGCCCTGC ACAAGCACGG CGCGTTCCAG GGAGCGTCGG TGTTCGGCAT CGCCGCCAGT CGGCCCGAAC AGATCGCCCA GGACATCCCC GCCATATCGG AACACGTGGA TTACGTGGCG CCGATGGTGT ACCCGTCGCA TTGGGGGCCC GGCGAGTACG GCGTGGAGGA CCCGGAGAGC CAGCCGTACG ACATCACGGC GCGCTCGCTG GCCGACTTCC AAGCATTGGT CGAGGACGGC CACGCGAAGG TCATACCGTG GTTGCAGGCA TTCAGCATGA GCGTGCCTTA CGGCCCCGAG GAGATCCGTG CACAGATCGA GGCCGCAGCG GACGTCGGCA TCGATTCGTT CCTCCTGTGG AATGCGGCAT GCCGCTATGA CGAACGGGCC CTTCCCCCGA CGTGA
|
Protein sequence | MAVTAVSAAV AIPLSIGDRP DATILGLPGE TIGPTGIRDV VISSQHGLEG LHATLDEQPL PLRRDGNWLR PDIGELPEGW HTLVVTPPPD LFGNATPAQV TFKVDATPPE LTVQPPEPVK PGTIGEIRGI ARDAVIVSMG DEEVQPAEDG SFVLPVRADA GTVTITARDA AGNTAVEEVP VPLRHPGMKA VHLTASAWAS PELREPVLDM VREGRIDTVQ LDIKDESGQI GYASQVPLAQ RIGANTRLYD AREALDVLHS EGVHVVGRLV AFRDPILGRA SWEEGEYDRV IQNTEGNAWS GYGEYSFTNF ADPVVRAYNI ALAEEAAELG FDDILYDYIR RPDGDVSQMV FPGLTTTPEE SIASFLAESR VALHKHGAFQ GASVFGIAAS RPEQIAQDIP AISEHVDYVA PMVYPSHWGP GEYGVEDPES QPYDITARSL ADFQALVEDG HAKVIPWLQA FSMSVPYGPE EIRAQIEAAA DVGIDSFLLW NAACRYDERA LPPT
|
| |