| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24490 |
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| Symbol | |
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| ID | 8387773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2639437 |
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| End bp | 2641140 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644976489 |
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| Product | fumarase |
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| Protein accession | YP_003134270 |
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| Protein GI | 257056438 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.208028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.69636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACTC CTGGGTCGGG GTCCTCCCCC GGCCGCACCA CACCTGAGTT CAACTACACC
GATGTCCTCC CGCTGGGGCC GGACACCACC GAGTACCGGC TCGTGACGAC CGAAGGCGTG
CGTGTCGTCG AGGCGGCGGG GCGCCGATTC CTGGAGATCG AGCCGGAGAC GTTGACCCTG
CTGGCGCGTA CGGCCATCAC CGACATCCAG CACCTGCTGC GTTCGTCGCA TCTGGCGCAG
CTGCGTGCGA TCGTCGACGA TCCCGAGGCC AGCGGCAACG ACCGGTTCGT GGCCATGGAC
CTCCTGCGTA ACGCCGCCAT CTCCGCAGGC GGTGTACTGC CCATGTGCCA GGACACGGGC
ACGGCCATCG TCATCGGCAA GCGTTCGGAG GGCGTGCTCA CCGGTGGGGA CGACGAACGA
GCGCTGTCGA AAGGCATCTT CGACGCCTAT CAACAGCTGA ATCTGCGGTA CTCGCAGATG
GCACCGCTGA CCTTCTGGGA GGAGCGCAAC ACCGGTACCA ACCTGCCGGC CCAGATCGAG
CTGTTCCACA AGGACGACAC CGGGGACGAC AAGGCCGACC CCAGTTACGA GTTCCTGTTC
ATGGCCAAGG GCGGCGGTAG CGCCAACAAG ACCTTCCTGT ATCAGGAAAC GAAGGCCGTG
CTGAACCCGA AACGGCTCGC GCGGTTCTTG GACGAGAAGC TGCGCAGCCT CGGCACCGCG
GCGTGTCCGC CCTACCATCT CGCGATCGTG GTCGGAGGCA TGTCCGCCGA GTACAACCTG
AAGGTGGCCA AACTCGCCTC CGCACGTTAC CTGGACGAAC TGCCGCGGGA GGGTTCGGAA
CTCGGCCACG GCTTCCGTGA CGTCGAGCTG GAACAGCAGG TGCTGGAGAT GACCCGCCAG
TTCGGCATCG GAGCCCAGTT CGGCGGCAAG TACTTCTGCC ACGACGTCCG GGTGATCCGG
CTTCCTCGAC ACGGCGCGTC CTGCCCCGTC GGCATCGCCG TGTCCTGTTC GGCCGACCGC
CAGGCCAAGG CCAAGATCAC TCCGGAAGGC GTGTTCCTGG AGCAACTCGA ACGGGACCCG
GCGCGCTTCC TGCCCGACGT GACCGCCGAC GAACTGTCGG ACGAGGTCGT CGAAGTGGAC
CTGACCAAGC CGATGTCCGA GATCCGGCAG CAGTTGTCGA GCCTGCCGGT GAAGACGCGC
CTGAGCCTGA CCGGCCCGCT GGTGGTGGCC CGCGACATCG CCCACGCCAA GATCGCCGAG
CGGTTGGAGG CGGGCGAGCC GATGCCGCAG TACCTGCGGG ACCACCCCGT GTACTACGCG
GGACCGGCGA AGACCCCCGA GGGCTACGCG TCCGGGTCCT TCGGGCCGAC GACGGCGGGA
CGGATGGACT CCTACGTCGA ACAGTTCCAG GCCGCCGGCG GCTCCCTGGT GATGTTGGCG
AAGGGCAACC GGTCGAAGCA GGTGACGGAG TCGTGCCGGA AGTACGGCGG CTTCTACCTC
GGCTCGATCG GTGGTCCCGC GGCACGGCTG GCCCAGGACT GCATCAAGAA GGTCGAGGTC
CTGGAATACC CCGAGCTGGG CATGGAAGCC GTGTGGCGGA TCGAGGTCGA GAATTTCCCC
GCGTTCATCG TGATCGACGA CAAGGGCAAC GACTTCTTCG CCGACACGTC CGAACCGGTA
CTGCAGATCT CGTTCCGCTC GTAG
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| Protein sequence | MTTPGSGSSP GRTTPEFNYT DVLPLGPDTT EYRLVTTEGV RVVEAAGRRF LEIEPETLTL
LARTAITDIQ HLLRSSHLAQ LRAIVDDPEA SGNDRFVAMD LLRNAAISAG GVLPMCQDTG
TAIVIGKRSE GVLTGGDDER ALSKGIFDAY QQLNLRYSQM APLTFWEERN TGTNLPAQIE
LFHKDDTGDD KADPSYEFLF MAKGGGSANK TFLYQETKAV LNPKRLARFL DEKLRSLGTA
ACPPYHLAIV VGGMSAEYNL KVAKLASARY LDELPREGSE LGHGFRDVEL EQQVLEMTRQ
FGIGAQFGGK YFCHDVRVIR LPRHGASCPV GIAVSCSADR QAKAKITPEG VFLEQLERDP
ARFLPDVTAD ELSDEVVEVD LTKPMSEIRQ QLSSLPVKTR LSLTGPLVVA RDIAHAKIAE
RLEAGEPMPQ YLRDHPVYYA GPAKTPEGYA SGSFGPTTAG RMDSYVEQFQ AAGGSLVMLA
KGNRSKQVTE SCRKYGGFYL GSIGGPAARL AQDCIKKVEV LEYPELGMEA VWRIEVENFP
AFIVIDDKGN DFFADTSEPV LQISFRS
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