| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24480 |
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| Symbol | |
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| ID | 8387772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 2638063 |
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| End bp | 2639091 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644976488 |
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| Product | RNA polymerase sigma factor SigB |
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| Protein accession | YP_003134269 |
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| Protein GI | 257056437 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0306487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.46381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCC AGACACTCGA ACGCGAGGCT CGCGGAATCC GCGAACGGGA CATTCCCGTG
CCCACCGACG ACGACGTTAT GCCCGCGCCC GCCGAAGAGG CCGACCTCGA CGCCCAGGGT
CCCGCCGCTG ACCTGGTGCG CGTGTACCTC AATGGTATCG GCAAAACGGC CCTTTTGACT
GCCGAGGAGG AAGTCGACCT CGCCAAGCGC ATCGAGGCGG GTGTGTTCGC ACAACACGTA
CTGGACACCT CCGACGATCT CTCCGAGGAG CGCAAGGCGG AGCTGTCGGA AGTCGTGCGG
GACGGGGAGG AGGCCAAAAA CCACCTCCTG CAGGCGAACC TCCGGCTCGT GGTGTCGCTG
GCCAAGCGCT ACACCGGGCG CGGCATGCCG CTGTTGGACC TCATCCAGGA GGGCAACCTG
GGCCTGATCC GCGCGGTGGA GAAGTTCGAC TACACCAAGG GCTTCAAGTT CTCCACCTAC
GCGACGTGGT GGATCCGCCA GGCCATCACA CGCGGCATGG CCGACCAGGG TCGCACCATC
CGCCTGCCGG TGCACCTCGT GGAGCAGGTG AACAAGCTCG CCCGCATCAA GCGGGACCTG
CACCAACGAC TCGGCCGGGA AGCCACCCAT GAGGAGCTGG CAGCCGAGTC CGGTATCGCG
GAGAAGAAGG TGGCCGACCT ACTCGACCAC GCCCGCGATC CCGTGAGCCT CGACATGCCC
GTCGGGGCGG ACGAGGACGC ACCACTGGGC GATTTCATCG AGGACTCCGA GGCCGCCAAC
GCCGAGAACT CGGTGATCTC GACGTTGCTG CAGGACGACC TACGTCGCGT GCTGGCCACG
CTCGACGACC GTGAAGAGCA CGTGATCCGC CTGCGTTACG GCCTCGACGA CGGCCAGCCT
CGCACGCTCG ACCAGATCGG CAAGCACTTC AGCCTGTCCC GCGAGCGCGT GCGGCAGATC
GAGCGCGAGG TCATGGCGAA GCTCCGCCAC GGCGAGCGGG CCGACAAGCT GCGCGCCTAC
GCGAGCTGA
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| Protein sequence | MSVQTLEREA RGIRERDIPV PTDDDVMPAP AEEADLDAQG PAADLVRVYL NGIGKTALLT
AEEEVDLAKR IEAGVFAQHV LDTSDDLSEE RKAELSEVVR DGEEAKNHLL QANLRLVVSL
AKRYTGRGMP LLDLIQEGNL GLIRAVEKFD YTKGFKFSTY ATWWIRQAIT RGMADQGRTI
RLPVHLVEQV NKLARIKRDL HQRLGREATH EELAAESGIA EKKVADLLDH ARDPVSLDMP
VGADEDAPLG DFIEDSEAAN AENSVISTLL QDDLRRVLAT LDDREEHVIR LRYGLDDGQP
RTLDQIGKHF SLSRERVRQI EREVMAKLRH GERADKLRAY AS
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