| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_24430 |
|---|
| Symbol | |
|---|
| ID | 8387767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharomonospora viridis DSM 43017 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013159 |
|---|
| Strand | + |
|---|
| Start bp | 2633610 |
|---|
| End bp | 2634539 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644976483 |
|---|
| Product | uncharacterized enzyme involved in pigment biosynthesis |
|---|
| Protein accession | YP_003134264 |
|---|
| Protein GI | 257056432 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2313] Uncharacterized enzyme involved in pigment biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.160237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACCC AACCCGACAC TCCACTGTCG CTGTCGCCCG AGGTCGCCGA CGCCGTCGCC
ACCCATGCGC CGATCGTCGC CCTCGAAAGC ACCTTGCTGT CCCACGGACT ACCACCCGGC
CGCAACCTGG AGGTCGCCCG CCGACTCGAG GGCGTCGTAC GTGAGGCGGG GGCGGTGCCC
GCCACGATCG CGGTCCTCGA CGGTGTCCCG CGCGTGGGAC TGACCGACGC CGAACTCGAA
CGGATCTGCT CCCCGGACGC AGAACTCGAC AAACTGTCAC TGCGCGACCT GGGTCCCACC
GTGGCGCTGG GTCGTTCGGG GGCCACCACG GTGGCGAGTA CAGCGGCGCT GGCCGCCGCG
GCGGGCATCC CGGTGTTCGC CACCGGCGGG CTCGGCGGCG TGCACCATCC GGTGCCGGGC
ACGAACGTGA CCTGGGATGT TTCCGCCGAC CTCGGGACCC TGGCGCGCAC GGACGTCCTG
GTGGTGTGCT CGGGTATGAA GTCGATCCTC GACATCGCCG CCACCCTGGA GGTCCTGGAG
ACACACTCGG TTCCCGTACT CGGCTACCGC ACCGACGACT TCCCCGCCTT CTACCTACGT
TCGTCCGGTC ATCCCGTGCC ACACCGGGTG GACGACCCGG CGCAGGCGGC GGCCGTCGTG
ACCGCGCACC GACGGTTCTC CTCCTCGGGG GTGTTGCTGG CCAACCCCAT ACCCGTCGAA
CACGAACTCG ACCGCGACGT TCACGACCGG TTGCTGGCCG AAGGACTGGA ACTGGTGCGA
AAGCGCGGGG TCACCGGGTC CGACGTCACA CCGGTTCTGC TGGAGCATTT CCACACCGCC
AGCGGTGGGG CCAGCCTCGA CGCCAATGAG GCGCTCGTGC TGTCCAACGC CGACCTCGCC
GCACGTATCG CCACGGAGCT CGCGCGATGA
|
|---|
| Protein sequence | MSTQPDTPLS LSPEVADAVA THAPIVALES TLLSHGLPPG RNLEVARRLE GVVREAGAVP
ATIAVLDGVP RVGLTDAELE RICSPDAELD KLSLRDLGPT VALGRSGATT VASTAALAAA
AGIPVFATGG LGGVHHPVPG TNVTWDVSAD LGTLARTDVL VVCSGMKSIL DIAATLEVLE
THSVPVLGYR TDDFPAFYLR SSGHPVPHRV DDPAQAAAVV TAHRRFSSSG VLLANPIPVE
HELDRDVHDR LLAEGLELVR KRGVTGSDVT PVLLEHFHTA SGGASLDANE ALVLSNADLA
ARIATELAR
|
|---|
| |